Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh8Q7TSK3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh8Q7TSK3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdh8Q7TSK3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh8Q7TSK3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh8Q7TSK3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh8Q7TSK3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdh8Q7TSK3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh8Q7TSK3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh8Q7TSK3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Pcdh8Q7TSK3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh8Q7TSK3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdh8Q7TSK3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh8Q7TSK3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh8Q7TSK3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh8Q7TSK3 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.02■□□□□ 0.64
Pcdh8Q7TSK3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh8Q7TSK3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pcdh8Q7TSK3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdh8Q7TSK3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh8Q7TSK3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh8Q7TSK3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdh8Q7TSK3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Pcdh8Q7TSK3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh8Q7TSK3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.02■□□□□ 0.63
Pcdh8Q7TSK3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Pcdh8Q7TSK3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Pcdh8Q7TSK3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh8Q7TSK3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh8Q7TSK3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.01■□□□□ 0.63
Pcdh8Q7TSK3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.01■□□□□ 0.63
Pcdh8Q7TSK3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh8Q7TSK3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh8Q7TSK3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh8Q7TSK3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh8Q7TSK3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh8Q7TSK3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh8Q7TSK3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh8Q7TSK3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh8Q7TSK3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh8Q7TSK3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh8Q7TSK3 Gm10616-201ENSMUST00000205285 2127 ntBASIC19■□□□□ 0.63
Pcdh8Q7TSK3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh8Q7TSK3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19■□□□□ 0.63
Pcdh8Q7TSK3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19■□□□□ 0.63
Pcdh8Q7TSK3 Spcs1-207ENSMUST00000228767 1008 ntBASIC19■□□□□ 0.63
Pcdh8Q7TSK3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Pcdh8Q7TSK3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh8Q7TSK3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh8Q7TSK3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh8Q7TSK3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh8Q7TSK3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh8Q7TSK3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pcdh8Q7TSK3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh8Q7TSK3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh8Q7TSK3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh8Q7TSK3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.99■□□□□ 0.63
Pcdh8Q7TSK3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pcdh8Q7TSK3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcdh8Q7TSK3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh8Q7TSK3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh8Q7TSK3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh8Q7TSK3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh8Q7TSK3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh8Q7TSK3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.99■□□□□ 0.63
Pcdh8Q7TSK3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh8Q7TSK3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh8Q7TSK3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh8Q7TSK3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.98■□□□□ 0.63
Pcdh8Q7TSK3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.98■□□□□ 0.63
Pcdh8Q7TSK3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh8Q7TSK3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh8Q7TSK3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh8Q7TSK3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh8Q7TSK3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh8Q7TSK3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh8Q7TSK3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh8Q7TSK3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh8Q7TSK3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh8Q7TSK3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh8Q7TSK3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh8Q7TSK3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Pcdh8Q7TSK3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.97■□□□□ 0.63
Pcdh8Q7TSK3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdh8Q7TSK3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh8Q7TSK3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Pcdh8Q7TSK3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh8Q7TSK3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh8Q7TSK3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdh8Q7TSK3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh8Q7TSK3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdh8Q7TSK3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh8Q7TSK3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh8Q7TSK3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh8Q7TSK3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdh8Q7TSK3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.96■□□□□ 0.63
Pcdh8Q7TSK3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.96■□□□□ 0.63
Pcdh8Q7TSK3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.96■□□□□ 0.63
Pcdh8Q7TSK3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh8Q7TSK3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms