Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Gm5408-201ENSMUST00000197998 747 ntBASIC19.94■□□□□ 0.78
Trim17Q7TPM3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim17Q7TPM3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Trim17Q7TPM3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Trim17Q7TPM3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Trim17Q7TPM3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Trim17Q7TPM3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim17Q7TPM3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim17Q7TPM3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.93■□□□□ 0.78
Trim17Q7TPM3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.93■□□□□ 0.78
Trim17Q7TPM3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim17Q7TPM3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim17Q7TPM3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim17Q7TPM3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trim17Q7TPM3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim17Q7TPM3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim17Q7TPM3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim17Q7TPM3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Gm7290-201ENSMUST00000104990 617 ntBASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Gm12918-201ENSMUST00000120234 636 ntBASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Gm15710-201ENSMUST00000121821 636 ntBASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Gm5075-201ENSMUST00000196916 622 ntBASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim17Q7TPM3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim17Q7TPM3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.9■□□□□ 0.78
Trim17Q7TPM3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim17Q7TPM3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim17Q7TPM3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim17Q7TPM3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trim17Q7TPM3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim17Q7TPM3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim17Q7TPM3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim17Q7TPM3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.9■□□□□ 0.78
Trim17Q7TPM3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim17Q7TPM3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim17Q7TPM3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Trim17Q7TPM3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trim17Q7TPM3 Gm13148-201ENSMUST00000118892 745 ntBASIC19.89■□□□□ 0.77
Trim17Q7TPM3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Trim17Q7TPM3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim17Q7TPM3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim17Q7TPM3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Trim17Q7TPM3 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.89■□□□□ 0.77
Trim17Q7TPM3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
Trim17Q7TPM3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trim17Q7TPM3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trim17Q7TPM3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim17Q7TPM3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim17Q7TPM3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim17Q7TPM3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim17Q7TPM3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Gm6365-201ENSMUST00000054711 744 ntBASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.88■□□□□ 0.77
Trim17Q7TPM3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim17Q7TPM3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim17Q7TPM3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim17Q7TPM3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim17Q7TPM3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim17Q7TPM3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Trim17Q7TPM3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trim17Q7TPM3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms