Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.96■■□□□ 1.43
Ddx58Q6Q899 Gm42555-201ENSMUST00000199304 1039 ntBASIC23.96■■□□□ 1.43
Ddx58Q6Q899 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx58Q6Q899 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx58Q6Q899 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx58Q6Q899 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
Ddx58Q6Q899 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx58Q6Q899 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx58Q6Q899 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC23.95■■□□□ 1.42
Ddx58Q6Q899 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx58Q6Q899 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Ddx58Q6Q899 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx58Q6Q899 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx58Q6Q899 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx58Q6Q899 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx58Q6Q899 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx58Q6Q899 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx58Q6Q899 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Ddx58Q6Q899 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx58Q6Q899 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx58Q6Q899 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx58Q6Q899 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx58Q6Q899 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.94■■□□□ 1.42
Ddx58Q6Q899 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx58Q6Q899 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx58Q6Q899 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx58Q6Q899 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx58Q6Q899 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx58Q6Q899 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
Ddx58Q6Q899 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx58Q6Q899 Gm10655-201ENSMUST00000098658 1397 ntBASIC23.92■■□□□ 1.42
Ddx58Q6Q899 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx58Q6Q899 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx58Q6Q899 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC23.92■■□□□ 1.42
Ddx58Q6Q899 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx58Q6Q899 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC23.92■■□□□ 1.42
Ddx58Q6Q899 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx58Q6Q899 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx58Q6Q899 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx58Q6Q899 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC23.91■■□□□ 1.42
Ddx58Q6Q899 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx58Q6Q899 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.91■■□□□ 1.42
Ddx58Q6Q899 CT025689.6-201ENSMUST00000224991 1104 ntBASIC23.91■■□□□ 1.42
Ddx58Q6Q899 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx58Q6Q899 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.91■■□□□ 1.42
Ddx58Q6Q899 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
Ddx58Q6Q899 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC23.9■■□□□ 1.42
Ddx58Q6Q899 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx58Q6Q899 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx58Q6Q899 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx58Q6Q899 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx58Q6Q899 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.9■■□□□ 1.42
Ddx58Q6Q899 Gm6420-201ENSMUST00000193885 723 ntBASIC23.9■■□□□ 1.42
Ddx58Q6Q899 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx58Q6Q899 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Ddx58Q6Q899 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx58Q6Q899 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
Ddx58Q6Q899 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Ddx58Q6Q899 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC23.89■■□□□ 1.42
Ddx58Q6Q899 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Ddx58Q6Q899 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx58Q6Q899 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx58Q6Q899 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx58Q6Q899 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.89■■□□□ 1.41
Ddx58Q6Q899 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx58Q6Q899 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Ddx58Q6Q899 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx58Q6Q899 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx58Q6Q899 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx58Q6Q899 Mir5133-201ENSMUST00000174955 77 ntBASIC23.88■■□□□ 1.41
Ddx58Q6Q899 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC23.88■■□□□ 1.41
Ddx58Q6Q899 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx58Q6Q899 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx58Q6Q899 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC23.88■■□□□ 1.41
Ddx58Q6Q899 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx58Q6Q899 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Gm27032-201ENSMUST00000183124 1116 ntBASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Gm32699-201ENSMUST00000221728 1988 ntBASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Ddx58Q6Q899 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx58Q6Q899 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx58Q6Q899 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx58Q6Q899 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx58Q6Q899 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Ddx58Q6Q899 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.86■■□□□ 1.41
Ddx58Q6Q899 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms