Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prrt3Q6PE13 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prrt3Q6PE13 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prrt3Q6PE13 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prrt3Q6PE13 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prrt3Q6PE13 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Prrt3Q6PE13 Gm13146-201ENSMUST00000118508 780 ntBASIC20.28■□□□□ 0.84
Prrt3Q6PE13 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.28■□□□□ 0.84
Prrt3Q6PE13 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.28■□□□□ 0.84
Prrt3Q6PE13 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Prrt3Q6PE13 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prrt3Q6PE13 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prrt3Q6PE13 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prrt3Q6PE13 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Prrt3Q6PE13 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.28■□□□□ 0.84
Prrt3Q6PE13 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prrt3Q6PE13 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prrt3Q6PE13 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prrt3Q6PE13 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prrt3Q6PE13 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Prrt3Q6PE13 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prrt3Q6PE13 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Prrt3Q6PE13 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prrt3Q6PE13 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prrt3Q6PE13 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prrt3Q6PE13 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.26■□□□□ 0.83
Prrt3Q6PE13 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.26■□□□□ 0.83
Prrt3Q6PE13 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.26■□□□□ 0.83
Prrt3Q6PE13 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Prrt3Q6PE13 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prrt3Q6PE13 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prrt3Q6PE13 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prrt3Q6PE13 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prrt3Q6PE13 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Prrt3Q6PE13 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Prrt3Q6PE13 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.24■□□□□ 0.83
Prrt3Q6PE13 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prrt3Q6PE13 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.24■□□□□ 0.83
Prrt3Q6PE13 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prrt3Q6PE13 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prrt3Q6PE13 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prrt3Q6PE13 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prrt3Q6PE13 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prrt3Q6PE13 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prrt3Q6PE13 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prrt3Q6PE13 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prrt3Q6PE13 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.23■□□□□ 0.83
Prrt3Q6PE13 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prrt3Q6PE13 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prrt3Q6PE13 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Prrt3Q6PE13 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Prrt3Q6PE13 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Prrt3Q6PE13 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prrt3Q6PE13 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prrt3Q6PE13 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prrt3Q6PE13 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prrt3Q6PE13 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prrt3Q6PE13 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.22■□□□□ 0.83
Prrt3Q6PE13 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prrt3Q6PE13 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Prrt3Q6PE13 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prrt3Q6PE13 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prrt3Q6PE13 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Prrt3Q6PE13 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prrt3Q6PE13 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prrt3Q6PE13 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prrt3Q6PE13 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.2■□□□□ 0.82
Prrt3Q6PE13 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.2■□□□□ 0.82
Prrt3Q6PE13 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prrt3Q6PE13 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prrt3Q6PE13 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prrt3Q6PE13 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Prrt3Q6PE13 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.19■□□□□ 0.82
Prrt3Q6PE13 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Prrt3Q6PE13 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prrt3Q6PE13 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Prrt3Q6PE13 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Prrt3Q6PE13 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Prrt3Q6PE13 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prrt3Q6PE13 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Prrt3Q6PE13 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Prrt3Q6PE13 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Prrt3Q6PE13 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.18■□□□□ 0.82
Prrt3Q6PE13 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms