Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scube1Q6NZL8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scube1Q6NZL8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scube1Q6NZL8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scube1Q6NZL8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scube1Q6NZL8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Scube1Q6NZL8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scube1Q6NZL8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scube1Q6NZL8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scube1Q6NZL8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.48■□□□□ 0.55
Scube1Q6NZL8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scube1Q6NZL8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.48■□□□□ 0.55
Scube1Q6NZL8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Scube1Q6NZL8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.48■□□□□ 0.55
Scube1Q6NZL8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scube1Q6NZL8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scube1Q6NZL8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.48■□□□□ 0.55
Scube1Q6NZL8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.48■□□□□ 0.55
Scube1Q6NZL8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scube1Q6NZL8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Scube1Q6NZL8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube1Q6NZL8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube1Q6NZL8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube1Q6NZL8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube1Q6NZL8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube1Q6NZL8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.47■□□□□ 0.55
Scube1Q6NZL8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scube1Q6NZL8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube1Q6NZL8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube1Q6NZL8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube1Q6NZL8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scube1Q6NZL8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube1Q6NZL8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Scube1Q6NZL8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Scube1Q6NZL8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scube1Q6NZL8 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.46■□□□□ 0.55
Scube1Q6NZL8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scube1Q6NZL8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scube1Q6NZL8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scube1Q6NZL8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scube1Q6NZL8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.46■□□□□ 0.55
Scube1Q6NZL8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scube1Q6NZL8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scube1Q6NZL8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scube1Q6NZL8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Scube1Q6NZL8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Gm7417-201ENSMUST00000192950 473 ntBASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scube1Q6NZL8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scube1Q6NZL8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scube1Q6NZL8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.43■□□□□ 0.54
Scube1Q6NZL8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.43■□□□□ 0.54
Scube1Q6NZL8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scube1Q6NZL8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scube1Q6NZL8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.43■□□□□ 0.54
Scube1Q6NZL8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scube1Q6NZL8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.43■□□□□ 0.54
Scube1Q6NZL8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Scube1Q6NZL8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scube1Q6NZL8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Scube1Q6NZL8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scube1Q6NZL8 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.43■□□□□ 0.54
Scube1Q6NZL8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scube1Q6NZL8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Scube1Q6NZL8 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.42■□□□□ 0.54
Scube1Q6NZL8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scube1Q6NZL8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Scube1Q6NZL8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scube1Q6NZL8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms