Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col11a2Q64739 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Col11a2Q64739 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Col11a2Q64739 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col11a2Q64739 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col11a2Q64739 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col11a2Q64739 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
Col11a2Q64739 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Col11a2Q64739 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
Col11a2Q64739 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.82■■□□□ 1.4
Col11a2Q64739 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Col11a2Q64739 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC23.81■■□□□ 1.4
Col11a2Q64739 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col11a2Q64739 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col11a2Q64739 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.81■■□□□ 1.4
Col11a2Q64739 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.81■■□□□ 1.4
Col11a2Q64739 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col11a2Q64739 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Col11a2Q64739 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col11a2Q64739 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col11a2Q64739 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Col11a2Q64739 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC23.8■■□□□ 1.4
Col11a2Q64739 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col11a2Q64739 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col11a2Q64739 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col11a2Q64739 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col11a2Q64739 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Col11a2Q64739 AL672049.1-201ENSMUST00000197943 91 ntBASIC23.79■■□□□ 1.4
Col11a2Q64739 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Col11a2Q64739 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
Col11a2Q64739 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.78■■□□□ 1.4
Col11a2Q64739 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Col11a2Q64739 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col11a2Q64739 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col11a2Q64739 Gm11249-201ENSMUST00000117071 859 ntBASIC23.78■■□□□ 1.4
Col11a2Q64739 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Col11a2Q64739 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC23.78■■□□□ 1.4
Col11a2Q64739 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col11a2Q64739 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Col11a2Q64739 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col11a2Q64739 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Col11a2Q64739 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
Col11a2Q64739 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Col11a2Q64739 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC23.77■■□□□ 1.4
Col11a2Q64739 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Col11a2Q64739 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col11a2Q64739 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col11a2Q64739 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col11a2Q64739 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC23.76■■□□□ 1.39
Col11a2Q64739 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col11a2Q64739 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Col11a2Q64739 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col11a2Q64739 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Col11a2Q64739 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col11a2Q64739 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col11a2Q64739 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col11a2Q64739 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Col11a2Q64739 Gm2399-201ENSMUST00000104944 225 ntBASIC23.75■■□□□ 1.39
Col11a2Q64739 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Col11a2Q64739 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Col11a2Q64739 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Col11a2Q64739 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Col11a2Q64739 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Col11a2Q64739 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Col11a2Q64739 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Col11a2Q64739 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col11a2Q64739 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col11a2Q64739 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col11a2Q64739 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col11a2Q64739 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col11a2Q64739 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col11a2Q64739 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col11a2Q64739 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Col11a2Q64739 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Col11a2Q64739 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col11a2Q64739 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col11a2Q64739 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col11a2Q64739 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Col11a2Q64739 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col11a2Q64739 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col11a2Q64739 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.73■■□□□ 1.39
Col11a2Q64739 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col11a2Q64739 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
Col11a2Q64739 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC23.73■■□□□ 1.39
Col11a2Q64739 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col11a2Q64739 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col11a2Q64739 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col11a2Q64739 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col11a2Q64739 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Col11a2Q64739 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col11a2Q64739 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Col11a2Q64739 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Col11a2Q64739 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Col11a2Q64739 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.71■■□□□ 1.39
Col11a2Q64739 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.71■■□□□ 1.39
Col11a2Q64739 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col11a2Q64739 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col11a2Q64739 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col11a2Q64739 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Col11a2Q64739 Gm11643-201ENSMUST00000119578 864 ntBASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms