Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc3Q64519 Gm9988-201ENSMUST00000069786 435 ntBASIC18.48■□□□□ 0.55
Sdc3Q64519 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.48■□□□□ 0.55
Sdc3Q64519 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc3Q64519 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc3Q64519 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sdc3Q64519 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc3Q64519 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc3Q64519 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sdc3Q64519 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sdc3Q64519 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Sdc3Q64519 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sdc3Q64519 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.47■□□□□ 0.55
Sdc3Q64519 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Sdc3Q64519 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sdc3Q64519 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sdc3Q64519 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.47■□□□□ 0.55
Sdc3Q64519 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sdc3Q64519 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sdc3Q64519 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sdc3Q64519 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sdc3Q64519 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sdc3Q64519 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.46■□□□□ 0.55
Sdc3Q64519 Gm42569-201ENSMUST00000200539 472 ntBASIC18.46■□□□□ 0.55
Sdc3Q64519 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sdc3Q64519 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sdc3Q64519 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sdc3Q64519 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Sdc3Q64519 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sdc3Q64519 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Sdc3Q64519 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sdc3Q64519 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.45■□□□□ 0.54
Sdc3Q64519 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sdc3Q64519 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sdc3Q64519 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sdc3Q64519 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sdc3Q64519 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Sdc3Q64519 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sdc3Q64519 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sdc3Q64519 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sdc3Q64519 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sdc3Q64519 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Sdc3Q64519 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Sdc3Q64519 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sdc3Q64519 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sdc3Q64519 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sdc3Q64519 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.44■□□□□ 0.54
Sdc3Q64519 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Sdc3Q64519 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sdc3Q64519 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sdc3Q64519 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sdc3Q64519 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sdc3Q64519 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.44■□□□□ 0.54
Sdc3Q64519 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Sdc3Q64519 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sdc3Q64519 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sdc3Q64519 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.43■□□□□ 0.54
Sdc3Q64519 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sdc3Q64519 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sdc3Q64519 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sdc3Q64519 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.43■□□□□ 0.54
Sdc3Q64519 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sdc3Q64519 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sdc3Q64519 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Sdc3Q64519 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.42■□□□□ 0.54
Sdc3Q64519 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc3Q64519 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc3Q64519 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.42■□□□□ 0.54
Sdc3Q64519 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.42■□□□□ 0.54
Sdc3Q64519 Gm42778-201ENSMUST00000199644 553 ntBASIC18.42■□□□□ 0.54
Sdc3Q64519 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc3Q64519 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc3Q64519 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc3Q64519 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Sdc3Q64519 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.42■□□□□ 0.54
Sdc3Q64519 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc3Q64519 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc3Q64519 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc3Q64519 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc3Q64519 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc3Q64519 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc3Q64519 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc3Q64519 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.41■□□□□ 0.54
Sdc3Q64519 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc3Q64519 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc3Q64519 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Sdc3Q64519 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc3Q64519 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Sdc3Q64519 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc3Q64519 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.41■□□□□ 0.54
Sdc3Q64519 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc3Q64519 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc3Q64519 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc3Q64519 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc3Q64519 Gm10849-201ENSMUST00000100397 618 ntBASIC18.4■□□□□ 0.54
Sdc3Q64519 Gm27801-201ENSMUST00000184174 223 ntBASIC18.4■□□□□ 0.54
Sdc3Q64519 Gm18671-201ENSMUST00000214826 683 ntBASIC18.4■□□□□ 0.54
Sdc3Q64519 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc3Q64519 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc3Q64519 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms