Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.53■□□□□ 0.56
AtmQ62388 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AtmQ62388 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AtmQ62388 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AtmQ62388 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
AtmQ62388 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AtmQ62388 Gm21362-201ENSMUST00000194272 928 ntBASIC18.52■□□□□ 0.56
AtmQ62388 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.52■□□□□ 0.56
AtmQ62388 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
AtmQ62388 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
AtmQ62388 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
AtmQ62388 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AtmQ62388 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
AtmQ62388 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AtmQ62388 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AtmQ62388 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AtmQ62388 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AtmQ62388 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.5■□□□□ 0.55
AtmQ62388 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AtmQ62388 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
AtmQ62388 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.5■□□□□ 0.55
AtmQ62388 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AtmQ62388 Gm10517-202ENSMUST00000192970 758 ntBASIC18.5■□□□□ 0.55
AtmQ62388 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AtmQ62388 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
AtmQ62388 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
AtmQ62388 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AtmQ62388 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AtmQ62388 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.49■□□□□ 0.55
AtmQ62388 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
AtmQ62388 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AtmQ62388 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AtmQ62388 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AtmQ62388 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AtmQ62388 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AtmQ62388 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.48■□□□□ 0.55
AtmQ62388 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
AtmQ62388 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AtmQ62388 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AtmQ62388 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
AtmQ62388 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AtmQ62388 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
AtmQ62388 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AtmQ62388 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
AtmQ62388 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AtmQ62388 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AtmQ62388 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AtmQ62388 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.48■□□□□ 0.55
AtmQ62388 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AtmQ62388 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AtmQ62388 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AtmQ62388 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AtmQ62388 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AtmQ62388 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
AtmQ62388 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AtmQ62388 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AtmQ62388 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
AtmQ62388 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AtmQ62388 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
AtmQ62388 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.47■□□□□ 0.55
AtmQ62388 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AtmQ62388 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AtmQ62388 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.47■□□□□ 0.55
AtmQ62388 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AtmQ62388 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AtmQ62388 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AtmQ62388 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AtmQ62388 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
AtmQ62388 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AtmQ62388 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AtmQ62388 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AtmQ62388 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
AtmQ62388 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
AtmQ62388 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
AtmQ62388 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
AtmQ62388 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.45■□□□□ 0.54
AtmQ62388 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
AtmQ62388 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
AtmQ62388 Gm10231-201ENSMUST00000181584 441 ntBASIC18.45■□□□□ 0.54
AtmQ62388 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AtmQ62388 Gm10175-202ENSMUST00000208752 441 ntBASIC18.45■□□□□ 0.54
AtmQ62388 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AtmQ62388 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
AtmQ62388 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AtmQ62388 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AtmQ62388 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
AtmQ62388 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.45■□□□□ 0.54
AtmQ62388 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AtmQ62388 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
AtmQ62388 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.44■□□□□ 0.54
AtmQ62388 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AtmQ62388 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AtmQ62388 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
AtmQ62388 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
AtmQ62388 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AtmQ62388 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AtmQ62388 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
AtmQ62388 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AtmQ62388 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
AtmQ62388 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms