Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.22□□□□□ -0.13
Ss18Q62280 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.22□□□□□ -0.13
Ss18Q62280 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ss18Q62280 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ss18Q62280 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ss18Q62280 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ss18Q62280 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ss18Q62280 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ss18Q62280 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ss18Q62280 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ss18Q62280 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ss18Q62280 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ss18Q62280 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ss18Q62280 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.21□□□□□ -0.13
Ss18Q62280 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ss18Q62280 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.21□□□□□ -0.13
Ss18Q62280 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ss18Q62280 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ss18Q62280 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ss18Q62280 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ss18Q62280 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ss18Q62280 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ss18Q62280 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ss18Q62280 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ss18Q62280 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ss18Q62280 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ss18Q62280 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ss18Q62280 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ss18Q62280 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ss18Q62280 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ss18Q62280 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ss18Q62280 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ss18Q62280 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ss18Q62280 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ss18Q62280 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ss18Q62280 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ss18Q62280 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ss18Q62280 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Ss18Q62280 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ss18Q62280 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ss18Q62280 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ss18Q62280 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.2□□□□□ -0.14
Ss18Q62280 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ss18Q62280 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ss18Q62280 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ss18Q62280 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ss18Q62280 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ss18Q62280 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ss18Q62280 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ss18Q62280 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ss18Q62280 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ss18Q62280 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ss18Q62280 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ss18Q62280 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ss18Q62280 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ss18Q62280 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
Ss18Q62280 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ss18Q62280 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.19□□□□□ -0.14
Ss18Q62280 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.19□□□□□ -0.14
Ss18Q62280 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ss18Q62280 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ss18Q62280 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ss18Q62280 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ss18Q62280 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ss18Q62280 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ss18Q62280 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ss18Q62280 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.18□□□□□ -0.14
Ss18Q62280 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ss18Q62280 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ss18Q62280 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ss18Q62280 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ss18Q62280 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ss18Q62280 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ss18Q62280 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ss18Q62280 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ss18Q62280 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ss18Q62280 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ss18Q62280 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ss18Q62280 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ss18Q62280 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ss18Q62280 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ss18Q62280 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ss18Q62280 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ss18Q62280 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ss18Q62280 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.17□□□□□ -0.14
Ss18Q62280 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ss18Q62280 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ss18Q62280 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ss18Q62280 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ss18Q62280 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.17□□□□□ -0.14
Ss18Q62280 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ss18Q62280 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ss18Q62280 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ss18Q62280 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ss18Q62280 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ss18Q62280 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ss18Q62280 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ss18Q62280 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ss18Q62280 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ss18Q62280 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms