Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scn9aQ62205 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scn9aQ62205 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scn9aQ62205 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scn9aQ62205 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Scn9aQ62205 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scn9aQ62205 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC23.11■■□□□ 1.29
Scn9aQ62205 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scn9aQ62205 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scn9aQ62205 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scn9aQ62205 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scn9aQ62205 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scn9aQ62205 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Scn9aQ62205 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Scn9aQ62205 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.1■■□□□ 1.29
Scn9aQ62205 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Scn9aQ62205 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Scn9aQ62205 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Scn9aQ62205 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
Scn9aQ62205 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn9aQ62205 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Scn9aQ62205 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn9aQ62205 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn9aQ62205 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn9aQ62205 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC23.09■■□□□ 1.29
Scn9aQ62205 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Scn9aQ62205 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC23.09■■□□□ 1.29
Scn9aQ62205 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn9aQ62205 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Scn9aQ62205 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Scn9aQ62205 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Scn9aQ62205 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Scn9aQ62205 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Scn9aQ62205 Gm6576-201ENSMUST00000169678 883 ntBASIC23.08■■□□□ 1.29
Scn9aQ62205 Krtap5-1-202ENSMUST00000188274 742 ntBASIC23.08■■□□□ 1.29
Scn9aQ62205 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
Scn9aQ62205 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Scn9aQ62205 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Scn9aQ62205 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC23.07■■□□□ 1.28
Scn9aQ62205 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scn9aQ62205 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scn9aQ62205 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scn9aQ62205 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scn9aQ62205 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scn9aQ62205 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scn9aQ62205 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Scn9aQ62205 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scn9aQ62205 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scn9aQ62205 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Scn9aQ62205 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scn9aQ62205 AC131586.2-201ENSMUST00000228370 1512 ntBASIC23.06■■□□□ 1.28
Scn9aQ62205 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scn9aQ62205 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scn9aQ62205 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC23.06■■□□□ 1.28
Scn9aQ62205 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scn9aQ62205 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scn9aQ62205 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scn9aQ62205 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.06■■□□□ 1.28
Scn9aQ62205 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.06■■□□□ 1.28
Scn9aQ62205 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Scn9aQ62205 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Scn9aQ62205 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Scn9aQ62205 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC23.05■■□□□ 1.28
Scn9aQ62205 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Scn9aQ62205 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Scn9aQ62205 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC23.05■■□□□ 1.28
Scn9aQ62205 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Scn9aQ62205 Gm12896-201ENSMUST00000118430 226 ntBASIC23.04■■□□□ 1.28
Scn9aQ62205 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC23.04■■□□□ 1.28
Scn9aQ62205 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Scn9aQ62205 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Scn9aQ62205 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Scn9aQ62205 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn9aQ62205 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
Scn9aQ62205 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Scn9aQ62205 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn9aQ62205 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Scn9aQ62205 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.03■■□□□ 1.28
Scn9aQ62205 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.03■■□□□ 1.28
Scn9aQ62205 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Scn9aQ62205 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC23.03■■□□□ 1.28
Scn9aQ62205 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn9aQ62205 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Scn9aQ62205 Dio3-201ENSMUST00000097228 1449 ntBASIC23.02■■□□□ 1.28
Scn9aQ62205 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC23.02■■□□□ 1.28
Scn9aQ62205 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC23.02■■□□□ 1.28
Scn9aQ62205 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Scn9aQ62205 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Scn9aQ62205 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Scn9aQ62205 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Scn9aQ62205 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.02■■□□□ 1.28
Scn9aQ62205 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Scn9aQ62205 AA386476-201ENSMUST00000098781 1665 ntBASIC23.02■■□□□ 1.28
Scn9aQ62205 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Scn9aQ62205 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC23.02■■□□□ 1.28
Scn9aQ62205 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC23.01■■□□□ 1.27
Scn9aQ62205 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.01■■□□□ 1.27
Scn9aQ62205 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC23.01■■□□□ 1.27
Scn9aQ62205 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Scn9aQ62205 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms