Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Foxn1Q61575 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.18■■□□□ 1.14
Foxn1Q61575 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxn1Q61575 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
Foxn1Q61575 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxn1Q61575 Gm21362-201ENSMUST00000194272 928 ntBASIC22.18■■□□□ 1.14
Foxn1Q61575 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC22.18■■□□□ 1.14
Foxn1Q61575 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxn1Q61575 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxn1Q61575 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxn1Q61575 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxn1Q61575 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Foxn1Q61575 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxn1Q61575 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxn1Q61575 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxn1Q61575 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxn1Q61575 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxn1Q61575 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxn1Q61575 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxn1Q61575 Gm13509-201ENSMUST00000119733 1308 ntBASIC22.17■■□□□ 1.14
Foxn1Q61575 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC22.17■■□□□ 1.14
Foxn1Q61575 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Foxn1Q61575 Mir1199-201ENSMUST00000117015 119 ntBASIC22.17■■□□□ 1.14
Foxn1Q61575 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Foxn1Q61575 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxn1Q61575 Gm10231-201ENSMUST00000181584 441 ntBASIC22.17■■□□□ 1.14
Foxn1Q61575 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxn1Q61575 Gm18666-201ENSMUST00000190039 958 ntBASIC22.17■■□□□ 1.14
Foxn1Q61575 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.17■■□□□ 1.14
Foxn1Q61575 Gm10175-202ENSMUST00000208752 441 ntBASIC22.17■■□□□ 1.14
Foxn1Q61575 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxn1Q61575 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxn1Q61575 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxn1Q61575 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxn1Q61575 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxn1Q61575 AC131586.2-201ENSMUST00000228370 1512 ntBASIC22.16■■□□□ 1.14
Foxn1Q61575 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Foxn1Q61575 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC22.16■■□□□ 1.14
Foxn1Q61575 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Foxn1Q61575 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Foxn1Q61575 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxn1Q61575 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Foxn1Q61575 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxn1Q61575 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxn1Q61575 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Foxn1Q61575 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxn1Q61575 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxn1Q61575 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Foxn1Q61575 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxn1Q61575 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxn1Q61575 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxn1Q61575 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC22.15■■□□□ 1.14
Foxn1Q61575 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
Foxn1Q61575 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC22.15■■□□□ 1.14
Foxn1Q61575 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC22.15■■□□□ 1.14
Foxn1Q61575 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxn1Q61575 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxn1Q61575 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
Foxn1Q61575 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxn1Q61575 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Foxn1Q61575 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxn1Q61575 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.15■■□□□ 1.14
Foxn1Q61575 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxn1Q61575 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.14
Foxn1Q61575 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Foxn1Q61575 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Foxn1Q61575 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Foxn1Q61575 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Foxn1Q61575 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC22.14■■□□□ 1.13
Foxn1Q61575 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.14■■□□□ 1.13
Foxn1Q61575 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.13■■□□□ 1.13
Foxn1Q61575 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Foxn1Q61575 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Foxn1Q61575 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Foxn1Q61575 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Foxn1Q61575 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Foxn1Q61575 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Foxn1Q61575 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Foxn1Q61575 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Foxn1Q61575 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Foxn1Q61575 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Foxn1Q61575 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Foxn1Q61575 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC22.13■■□□□ 1.13
Foxn1Q61575 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxn1Q61575 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxn1Q61575 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxn1Q61575 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxn1Q61575 Gm20472-201ENSMUST00000174403 1240 ntBASIC22.12■■□□□ 1.13
Foxn1Q61575 Gm10459-201ENSMUST00000202708 1155 ntBASIC22.12■■□□□ 1.13
Foxn1Q61575 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Foxn1Q61575 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC22.12■■□□□ 1.13
Foxn1Q61575 Nrn1-203ENSMUST00000223611 1443 ntBASIC22.12■■□□□ 1.13
Foxn1Q61575 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxn1Q61575 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Foxn1Q61575 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Foxn1Q61575 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.11■■□□□ 1.13
Foxn1Q61575 Gm11249-201ENSMUST00000117071 859 ntBASIC22.11■■□□□ 1.13
Foxn1Q61575 Gm6433-201ENSMUST00000118634 875 ntBASIC22.11■■□□□ 1.13
Foxn1Q61575 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Foxn1Q61575 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms