Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Vsx2Q61412 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Vsx2Q61412 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Vsx2Q61412 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx2Q61412 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx2Q61412 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx2Q61412 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx2Q61412 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Vsx2Q61412 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx2Q61412 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx2Q61412 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Vsx2Q61412 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx2Q61412 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx2Q61412 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Vsx2Q61412 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx2Q61412 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx2Q61412 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx2Q61412 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx2Q61412 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.73■□□□□ 0.59
Vsx2Q61412 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx2Q61412 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx2Q61412 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx2Q61412 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx2Q61412 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx2Q61412 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Vsx2Q61412 Gm26833-201ENSMUST00000180899 440 ntBASIC18.73■□□□□ 0.59
Vsx2Q61412 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Vsx2Q61412 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.73■□□□□ 0.59
Vsx2Q61412 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx2Q61412 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx2Q61412 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx2Q61412 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx2Q61412 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Vsx2Q61412 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.72■□□□□ 0.59
Vsx2Q61412 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vsx2Q61412 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vsx2Q61412 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Vsx2Q61412 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vsx2Q61412 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vsx2Q61412 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Vsx2Q61412 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.72■□□□□ 0.59
Vsx2Q61412 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vsx2Q61412 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vsx2Q61412 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Vsx2Q61412 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.72■□□□□ 0.59
Vsx2Q61412 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vsx2Q61412 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vsx2Q61412 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Vsx2Q61412 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vsx2Q61412 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Vsx2Q61412 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.71■□□□□ 0.59
Vsx2Q61412 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vsx2Q61412 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.71■□□□□ 0.59
Vsx2Q61412 Smad6-203ENSMUST00000179458 273 ntBASIC18.71■□□□□ 0.59
Vsx2Q61412 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vsx2Q61412 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vsx2Q61412 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vsx2Q61412 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.71■□□□□ 0.59
Vsx2Q61412 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vsx2Q61412 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Vsx2Q61412 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vsx2Q61412 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vsx2Q61412 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.7■□□□□ 0.58
Vsx2Q61412 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vsx2Q61412 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Vsx2Q61412 Gm40848-201ENSMUST00000221998 324 ntBASIC18.7■□□□□ 0.58
Vsx2Q61412 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Vsx2Q61412 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vsx2Q61412 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx2Q61412 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx2Q61412 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx2Q61412 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Vsx2Q61412 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx2Q61412 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Vsx2Q61412 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx2Q61412 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Vsx2Q61412 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx2Q61412 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vsx2Q61412 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx2Q61412 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx2Q61412 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx2Q61412 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx2Q61412 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx2Q61412 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx2Q61412 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.68■□□□□ 0.58
Vsx2Q61412 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx2Q61412 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vsx2Q61412 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.67■□□□□ 0.58
Vsx2Q61412 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Vsx2Q61412 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vsx2Q61412 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Vsx2Q61412 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.67■□□□□ 0.58
Vsx2Q61412 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.67■□□□□ 0.58
Vsx2Q61412 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vsx2Q61412 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.67■□□□□ 0.58
Vsx2Q61412 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
Vsx2Q61412 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vsx2Q61412 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vsx2Q61412 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vsx2Q61412 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms