Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.43■□□□□ 0.7
Hif1aQ61221 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Hif1aQ61221 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hif1aQ61221 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hif1aQ61221 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hif1aQ61221 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hif1aQ61221 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hif1aQ61221 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.42■□□□□ 0.7
Hif1aQ61221 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Hif1aQ61221 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hif1aQ61221 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hif1aQ61221 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Hif1aQ61221 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hif1aQ61221 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hif1aQ61221 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hif1aQ61221 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hif1aQ61221 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hif1aQ61221 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hif1aQ61221 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hif1aQ61221 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hif1aQ61221 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hif1aQ61221 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hif1aQ61221 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hif1aQ61221 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hif1aQ61221 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hif1aQ61221 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.41■□□□□ 0.7
Hif1aQ61221 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hif1aQ61221 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hif1aQ61221 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.4■□□□□ 0.7
Hif1aQ61221 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Hif1aQ61221 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hif1aQ61221 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
Hif1aQ61221 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hif1aQ61221 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hif1aQ61221 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hif1aQ61221 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hif1aQ61221 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hif1aQ61221 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hif1aQ61221 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hif1aQ61221 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hif1aQ61221 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hif1aQ61221 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hif1aQ61221 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hif1aQ61221 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hif1aQ61221 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hif1aQ61221 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hif1aQ61221 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hif1aQ61221 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.39■□□□□ 0.69
Hif1aQ61221 Gm45102-201ENSMUST00000207427 857 ntBASIC19.39■□□□□ 0.69
Hif1aQ61221 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hif1aQ61221 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hif1aQ61221 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hif1aQ61221 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hif1aQ61221 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hif1aQ61221 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hif1aQ61221 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.39■□□□□ 0.69
Hif1aQ61221 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.38■□□□□ 0.69
Hif1aQ61221 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.38■□□□□ 0.69
Hif1aQ61221 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.38■□□□□ 0.69
Hif1aQ61221 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hif1aQ61221 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hif1aQ61221 Rps24-207ENSMUST00000224568 714 ntBASIC19.38■□□□□ 0.69
Hif1aQ61221 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hif1aQ61221 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hif1aQ61221 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hif1aQ61221 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.37■□□□□ 0.69
Hif1aQ61221 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hif1aQ61221 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hif1aQ61221 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hif1aQ61221 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hif1aQ61221 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hif1aQ61221 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hif1aQ61221 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hif1aQ61221 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Hif1aQ61221 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hif1aQ61221 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hif1aQ61221 BC021767-201ENSMUST00000126387 1716 ntBASIC19.37■□□□□ 0.69
Hif1aQ61221 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hif1aQ61221 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.36■□□□□ 0.69
Hif1aQ61221 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hif1aQ61221 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hif1aQ61221 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hif1aQ61221 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Hif1aQ61221 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Hif1aQ61221 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hif1aQ61221 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hif1aQ61221 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hif1aQ61221 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Hif1aQ61221 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hif1aQ61221 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hif1aQ61221 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hif1aQ61221 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hif1aQ61221 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hif1aQ61221 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hif1aQ61221 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Hif1aQ61221 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hif1aQ61221 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hif1aQ61221 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.34■□□□□ 0.69
Hif1aQ61221 Gm14117-201ENSMUST00000122417 843 ntBASIC19.34■□□□□ 0.69
Hif1aQ61221 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms