Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcfc1Q61191 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcfc1Q61191 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hcfc1Q61191 Dio3-201ENSMUST00000097228 1449 ntBASIC16.38■□□□□ 0.21
Hcfc1Q61191 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Hcfc1Q61191 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcfc1Q61191 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcfc1Q61191 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Hcfc1Q61191 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcfc1Q61191 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.38■□□□□ 0.21
Hcfc1Q61191 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcfc1Q61191 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Hcfc1Q61191 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.37■□□□□ 0.21
Hcfc1Q61191 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcfc1Q61191 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.37■□□□□ 0.21
Hcfc1Q61191 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcfc1Q61191 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.37■□□□□ 0.21
Hcfc1Q61191 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.37■□□□□ 0.21
Hcfc1Q61191 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.37■□□□□ 0.21
Hcfc1Q61191 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hcfc1Q61191 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcfc1Q61191 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcfc1Q61191 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hcfc1Q61191 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcfc1Q61191 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.37■□□□□ 0.21
Hcfc1Q61191 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hcfc1Q61191 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.36■□□□□ 0.21
Hcfc1Q61191 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.36■□□□□ 0.21
Hcfc1Q61191 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Hcfc1Q61191 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcfc1Q61191 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcfc1Q61191 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hcfc1Q61191 Gm715-201ENSMUST00000117865 831 ntBASIC16.36■□□□□ 0.21
Hcfc1Q61191 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hcfc1Q61191 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcfc1Q61191 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcfc1Q61191 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Hcfc1Q61191 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcfc1Q61191 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcfc1Q61191 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.35■□□□□ 0.21
Hcfc1Q61191 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcfc1Q61191 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.35■□□□□ 0.21
Hcfc1Q61191 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcfc1Q61191 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcfc1Q61191 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcfc1Q61191 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcfc1Q61191 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcfc1Q61191 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcfc1Q61191 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hcfc1Q61191 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hcfc1Q61191 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hcfc1Q61191 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcfc1Q61191 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcfc1Q61191 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcfc1Q61191 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hcfc1Q61191 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcfc1Q61191 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcfc1Q61191 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.34■□□□□ 0.21
Hcfc1Q61191 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hcfc1Q61191 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Hcfc1Q61191 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcfc1Q61191 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hcfc1Q61191 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.34■□□□□ 0.21
Hcfc1Q61191 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcfc1Q61191 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hcfc1Q61191 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Hcfc1Q61191 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hcfc1Q61191 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.33■□□□□ 0.21
Hcfc1Q61191 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Hcfc1Q61191 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcfc1Q61191 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcfc1Q61191 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcfc1Q61191 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcfc1Q61191 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hcfc1Q61191 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcfc1Q61191 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hcfc1Q61191 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1Q61191 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.32■□□□□ 0.2
Hcfc1Q61191 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1Q61191 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.32■□□□□ 0.2
Hcfc1Q61191 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1Q61191 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1Q61191 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.32■□□□□ 0.2
Hcfc1Q61191 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1Q61191 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1Q61191 Gm22325-201ENSMUST00000158904 308 ntBASIC16.31■□□□□ 0.2
Hcfc1Q61191 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1Q61191 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Hcfc1Q61191 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1Q61191 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1Q61191 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1Q61191 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hcfc1Q61191 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1Q61191 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1Q61191 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1Q61191 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1Q61191 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.31■□□□□ 0.2
Hcfc1Q61191 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1Q61191 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1Q61191 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms