Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Sdf4Q61112 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdf4Q61112 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdf4Q61112 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdf4Q61112 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Sdf4Q61112 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.55■□□□□ 0.72
Sdf4Q61112 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdf4Q61112 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdf4Q61112 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdf4Q61112 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Sdf4Q61112 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sdf4Q61112 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdf4Q61112 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.54■□□□□ 0.72
Sdf4Q61112 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Sdf4Q61112 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdf4Q61112 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sdf4Q61112 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Sdf4Q61112 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.54■□□□□ 0.72
Sdf4Q61112 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sdf4Q61112 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdf4Q61112 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdf4Q61112 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdf4Q61112 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Sdf4Q61112 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Sdf4Q61112 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Sdf4Q61112 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdf4Q61112 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdf4Q61112 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sdf4Q61112 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdf4Q61112 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdf4Q61112 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdf4Q61112 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Sdf4Q61112 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sdf4Q61112 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sdf4Q61112 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sdf4Q61112 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sdf4Q61112 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Sdf4Q61112 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sdf4Q61112 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.52■□□□□ 0.72
Sdf4Q61112 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Sdf4Q61112 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sdf4Q61112 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sdf4Q61112 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdf4Q61112 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.51■□□□□ 0.71
Sdf4Q61112 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdf4Q61112 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdf4Q61112 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
Sdf4Q61112 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdf4Q61112 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.51■□□□□ 0.71
Sdf4Q61112 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.51■□□□□ 0.71
Sdf4Q61112 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.51■□□□□ 0.71
Sdf4Q61112 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdf4Q61112 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Sdf4Q61112 Gm40848-201ENSMUST00000221998 324 ntBASIC19.51■□□□□ 0.71
Sdf4Q61112 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sdf4Q61112 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.51■□□□□ 0.71
Sdf4Q61112 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdf4Q61112 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Sdf4Q61112 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdf4Q61112 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Sdf4Q61112 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdf4Q61112 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sdf4Q61112 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdf4Q61112 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Sdf4Q61112 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdf4Q61112 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sdf4Q61112 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdf4Q61112 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdf4Q61112 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdf4Q61112 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.5■□□□□ 0.71
Sdf4Q61112 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdf4Q61112 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdf4Q61112 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Sdf4Q61112 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.5■□□□□ 0.71
Sdf4Q61112 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdf4Q61112 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdf4Q61112 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdf4Q61112 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdf4Q61112 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdf4Q61112 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdf4Q61112 Gm27801-201ENSMUST00000184174 223 ntBASIC19.49■□□□□ 0.71
Sdf4Q61112 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sdf4Q61112 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdf4Q61112 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.49■□□□□ 0.71
Sdf4Q61112 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sdf4Q61112 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.48■□□□□ 0.71
Sdf4Q61112 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.48■□□□□ 0.71
Sdf4Q61112 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.48■□□□□ 0.71
Sdf4Q61112 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sdf4Q61112 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sdf4Q61112 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sdf4Q61112 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdf4Q61112 Notumos-201ENSMUST00000151998 2659 ntBASIC19.48■□□□□ 0.71
Sdf4Q61112 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdf4Q61112 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Sdf4Q61112 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Sdf4Q61112 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.47■□□□□ 0.71
Sdf4Q61112 Gm43060-201ENSMUST00000200621 289 ntBASIC19.47■□□□□ 0.71
Sdf4Q61112 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.47■□□□□ 0.71
Sdf4Q61112 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms