Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpc1Q61056 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpc1Q61056 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trpc1Q61056 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.69■□□□□ 0.58
Trpc1Q61056 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpc1Q61056 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpc1Q61056 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Trpc1Q61056 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.69■□□□□ 0.58
Trpc1Q61056 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trpc1Q61056 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Trpc1Q61056 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trpc1Q61056 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpc1Q61056 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpc1Q61056 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.68■□□□□ 0.58
Trpc1Q61056 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trpc1Q61056 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trpc1Q61056 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
Trpc1Q61056 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trpc1Q61056 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Trpc1Q61056 Gm13241-201ENSMUST00000094493 780 ntBASIC18.68■□□□□ 0.58
Trpc1Q61056 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trpc1Q61056 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trpc1Q61056 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trpc1Q61056 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trpc1Q61056 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trpc1Q61056 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpc1Q61056 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
Trpc1Q61056 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trpc1Q61056 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpc1Q61056 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.67■□□□□ 0.58
Trpc1Q61056 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpc1Q61056 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpc1Q61056 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpc1Q61056 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpc1Q61056 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpc1Q61056 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpc1Q61056 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpc1Q61056 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpc1Q61056 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpc1Q61056 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.66■□□□□ 0.58
Trpc1Q61056 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.66■□□□□ 0.58
Trpc1Q61056 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Trpc1Q61056 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Trpc1Q61056 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpc1Q61056 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Trpc1Q61056 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trpc1Q61056 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpc1Q61056 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trpc1Q61056 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpc1Q61056 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trpc1Q61056 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trpc1Q61056 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trpc1Q61056 Gm15039-201ENSMUST00000118914 875 ntBASIC18.65■□□□□ 0.58
Trpc1Q61056 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.65■□□□□ 0.58
Trpc1Q61056 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.65■□□□□ 0.58
Trpc1Q61056 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trpc1Q61056 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trpc1Q61056 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.65■□□□□ 0.58
Trpc1Q61056 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trpc1Q61056 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trpc1Q61056 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trpc1Q61056 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Trpc1Q61056 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trpc1Q61056 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trpc1Q61056 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trpc1Q61056 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trpc1Q61056 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trpc1Q61056 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trpc1Q61056 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
Trpc1Q61056 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trpc1Q61056 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trpc1Q61056 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trpc1Q61056 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Trpc1Q61056 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trpc1Q61056 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trpc1Q61056 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trpc1Q61056 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trpc1Q61056 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trpc1Q61056 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Trpc1Q61056 Gm21956-201ENSMUST00000179946 522 ntBASIC18.63■□□□□ 0.57
Trpc1Q61056 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trpc1Q61056 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.63■□□□□ 0.57
Trpc1Q61056 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trpc1Q61056 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trpc1Q61056 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trpc1Q61056 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.63■□□□□ 0.57
Trpc1Q61056 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trpc1Q61056 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpc1Q61056 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpc1Q61056 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpc1Q61056 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpc1Q61056 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpc1Q61056 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpc1Q61056 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpc1Q61056 Gm12922-201ENSMUST00000120626 809 ntBASIC18.62■□□□□ 0.57
Trpc1Q61056 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.62■□□□□ 0.57
Trpc1Q61056 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trpc1Q61056 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpc1Q61056 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trpc1Q61056 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms