Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.82■□□□□ 0.76
Slc6a4Q60857 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a4Q60857 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.82■□□□□ 0.76
Slc6a4Q60857 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.82■□□□□ 0.76
Slc6a4Q60857 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a4Q60857 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.82■□□□□ 0.76
Slc6a4Q60857 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a4Q60857 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a4Q60857 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a4Q60857 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a4Q60857 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Slc6a4Q60857 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a4Q60857 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Slc6a4Q60857 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc6a4Q60857 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slc6a4Q60857 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc6a4Q60857 Gm13146-201ENSMUST00000118508 780 ntBASIC19.81■□□□□ 0.76
Slc6a4Q60857 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.81■□□□□ 0.76
Slc6a4Q60857 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slc6a4Q60857 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slc6a4Q60857 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.81■□□□□ 0.76
Slc6a4Q60857 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc6a4Q60857 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc6a4Q60857 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc6a4Q60857 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc6a4Q60857 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc6a4Q60857 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc6a4Q60857 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc6a4Q60857 Gm7514-201ENSMUST00000209475 934 ntBASIC19.8■□□□□ 0.76
Slc6a4Q60857 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Slc6a4Q60857 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc6a4Q60857 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Slc6a4Q60857 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc6a4Q60857 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc6a4Q60857 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.8■□□□□ 0.76
Slc6a4Q60857 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc6a4Q60857 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Slc6a4Q60857 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a4Q60857 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a4Q60857 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a4Q60857 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a4Q60857 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a4Q60857 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.79■□□□□ 0.76
Slc6a4Q60857 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a4Q60857 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a4Q60857 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a4Q60857 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Slc6a4Q60857 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a4Q60857 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a4Q60857 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a4Q60857 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a4Q60857 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Slc6a4Q60857 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Slc6a4Q60857 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Slc6a4Q60857 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.78■□□□□ 0.76
Slc6a4Q60857 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a4Q60857 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a4Q60857 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a4Q60857 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a4Q60857 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Slc6a4Q60857 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a4Q60857 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a4Q60857 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Slc6a4Q60857 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a4Q60857 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a4Q60857 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a4Q60857 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a4Q60857 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Slc6a4Q60857 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a4Q60857 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.77■□□□□ 0.76
Slc6a4Q60857 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a4Q60857 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a4Q60857 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Slc6a4Q60857 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Slc6a4Q60857 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a4Q60857 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a4Q60857 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Slc6a4Q60857 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Slc6a4Q60857 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a4Q60857 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.76■□□□□ 0.75
Slc6a4Q60857 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a4Q60857 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Slc6a4Q60857 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Slc6a4Q60857 Gm7860-201ENSMUST00000121190 879 ntBASIC19.76■□□□□ 0.75
Slc6a4Q60857 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.76■□□□□ 0.75
Slc6a4Q60857 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a4Q60857 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a4Q60857 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a4Q60857 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a4Q60857 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a4Q60857 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a4Q60857 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a4Q60857 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a4Q60857 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a4Q60857 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a4Q60857 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a4Q60857 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a4Q60857 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a4Q60857 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a4Q60857 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms