Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.4■□□□□ 0.7
Col12a1Q60847 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col12a1Q60847 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col12a1Q60847 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col12a1Q60847 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col12a1Q60847 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col12a1Q60847 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col12a1Q60847 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col12a1Q60847 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col12a1Q60847 Gm27741-201ENSMUST00000185060 237 ntBASIC19.4■□□□□ 0.7
Col12a1Q60847 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col12a1Q60847 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col12a1Q60847 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Col12a1Q60847 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col12a1Q60847 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col12a1Q60847 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col12a1Q60847 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col12a1Q60847 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.39■□□□□ 0.69
Col12a1Q60847 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col12a1Q60847 Gm7367-201ENSMUST00000057611 492 ntBASIC19.39■□□□□ 0.69
Col12a1Q60847 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Col12a1Q60847 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Col12a1Q60847 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col12a1Q60847 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.38■□□□□ 0.69
Col12a1Q60847 Gm43799-201ENSMUST00000201845 579 ntBASIC19.38■□□□□ 0.69
Col12a1Q60847 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Col12a1Q60847 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col12a1Q60847 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col12a1Q60847 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col12a1Q60847 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col12a1Q60847 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col12a1Q60847 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Col12a1Q60847 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.38■□□□□ 0.69
Col12a1Q60847 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.38■□□□□ 0.69
Col12a1Q60847 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col12a1Q60847 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col12a1Q60847 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col12a1Q60847 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.37■□□□□ 0.69
Col12a1Q60847 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.37■□□□□ 0.69
Col12a1Q60847 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col12a1Q60847 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.37■□□□□ 0.69
Col12a1Q60847 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Col12a1Q60847 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.37■□□□□ 0.69
Col12a1Q60847 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col12a1Q60847 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col12a1Q60847 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.37■□□□□ 0.69
Col12a1Q60847 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.36■□□□□ 0.69
Col12a1Q60847 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.36■□□□□ 0.69
Col12a1Q60847 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col12a1Q60847 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.36■□□□□ 0.69
Col12a1Q60847 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col12a1Q60847 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col12a1Q60847 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col12a1Q60847 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.36■□□□□ 0.69
Col12a1Q60847 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col12a1Q60847 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Col12a1Q60847 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col12a1Q60847 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Col12a1Q60847 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col12a1Q60847 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col12a1Q60847 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.35■□□□□ 0.69
Col12a1Q60847 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Col12a1Q60847 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col12a1Q60847 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col12a1Q60847 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Col12a1Q60847 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col12a1Q60847 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col12a1Q60847 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col12a1Q60847 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col12a1Q60847 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col12a1Q60847 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col12a1Q60847 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Col12a1Q60847 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Col12a1Q60847 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Col12a1Q60847 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col12a1Q60847 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col12a1Q60847 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col12a1Q60847 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.33■□□□□ 0.69
Col12a1Q60847 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col12a1Q60847 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.33■□□□□ 0.69
Col12a1Q60847 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Col12a1Q60847 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.33■□□□□ 0.68
Col12a1Q60847 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col12a1Q60847 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col12a1Q60847 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col12a1Q60847 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col12a1Q60847 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Col12a1Q60847 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col12a1Q60847 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Col12a1Q60847 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Col12a1Q60847 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col12a1Q60847 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col12a1Q60847 Gm15378-201ENSMUST00000121894 207 ntBASIC19.31■□□□□ 0.68
Col12a1Q60847 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col12a1Q60847 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Col12a1Q60847 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col12a1Q60847 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.31■□□□□ 0.68
Col12a1Q60847 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col12a1Q60847 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col12a1Q60847 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms