Protein–RNA interactions for Protein: Q60771

Cldn11, Claudin-11, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn11Q60771 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.02■□□□□ 0.8
Cldn11Q60771 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
Cldn11Q60771 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Cldn11Q60771 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
Cldn11Q60771 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Cldn11Q60771 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cldn11Q60771 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cldn11Q60771 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn11Q60771 Gm13146-201ENSMUST00000118508 780 ntBASIC20.01■□□□□ 0.79
Cldn11Q60771 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn11Q60771 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn11Q60771 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cldn11Q60771 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn11Q60771 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn11Q60771 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20■□□□□ 0.79
Cldn11Q60771 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
Cldn11Q60771 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cldn11Q60771 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn11Q60771 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cldn11Q60771 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn11Q60771 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn11Q60771 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Cldn11Q60771 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cldn11Q60771 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn11Q60771 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cldn11Q60771 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn11Q60771 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn11Q60771 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Cldn11Q60771 Gm7860-201ENSMUST00000121190 879 ntBASIC19.99■□□□□ 0.79
Cldn11Q60771 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.99■□□□□ 0.79
Cldn11Q60771 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.99■□□□□ 0.79
Cldn11Q60771 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn11Q60771 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.99■□□□□ 0.79
Cldn11Q60771 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.99■□□□□ 0.79
Cldn11Q60771 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn11Q60771 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.99■□□□□ 0.79
Cldn11Q60771 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn11Q60771 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn11Q60771 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn11Q60771 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn11Q60771 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.98■□□□□ 0.79
Cldn11Q60771 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn11Q60771 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.98■□□□□ 0.79
Cldn11Q60771 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn11Q60771 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.98■□□□□ 0.79
Cldn11Q60771 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.98■□□□□ 0.79
Cldn11Q60771 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn11Q60771 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn11Q60771 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cldn11Q60771 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Cldn11Q60771 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Cldn11Q60771 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn11Q60771 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn11Q60771 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn11Q60771 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn11Q60771 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.97■□□□□ 0.79
Cldn11Q60771 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.97■□□□□ 0.79
Cldn11Q60771 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn11Q60771 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn11Q60771 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn11Q60771 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Cldn11Q60771 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.96■□□□□ 0.79
Cldn11Q60771 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Cldn11Q60771 Gm37179-201ENSMUST00000194862 823 ntBASIC19.96■□□□□ 0.79
Cldn11Q60771 Gm7514-201ENSMUST00000209475 934 ntBASIC19.96■□□□□ 0.79
Cldn11Q60771 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn11Q60771 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn11Q60771 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.96■□□□□ 0.79
Cldn11Q60771 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn11Q60771 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn11Q60771 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cldn11Q60771 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn11Q60771 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Cldn11Q60771 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn11Q60771 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn11Q60771 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn11Q60771 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn11Q60771 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn11Q60771 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn11Q60771 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Cldn11Q60771 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.94■□□□□ 0.78
Cldn11Q60771 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn11Q60771 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn11Q60771 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Cldn11Q60771 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn11Q60771 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn11Q60771 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cldn11Q60771 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn11Q60771 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn11Q60771 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn11Q60771 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn11Q60771 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.93■□□□□ 0.78
Cldn11Q60771 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn11Q60771 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn11Q60771 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn11Q60771 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn11Q60771 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Cldn11Q60771 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn11Q60771 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn11Q60771 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms