Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Gm4968-201ENSMUST00000071458 858 ntBASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Gm13534-201ENSMUST00000121169 513 ntBASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Nespas-201ENSMUST00000143738 1083 ntBASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Gm5408-201ENSMUST00000197998 747 ntBASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-2Q5R1I4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-2Q5R1I4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-2Q5R1I4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-2Q5R1I4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-2Q5R1I4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-2Q5R1I4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.98■□□□□ 0.31
Trav6-2Q5R1I4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-2Q5R1I4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-2Q5R1I4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-2Q5R1I4 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.98■□□□□ 0.31
Trav6-2Q5R1I4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-2Q5R1I4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-2Q5R1I4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-2Q5R1I4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav6-2Q5R1I4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav6-2Q5R1I4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-2Q5R1I4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav6-2Q5R1I4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.96■□□□□ 0.31
Trav6-2Q5R1I4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-2Q5R1I4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.96■□□□□ 0.31
Trav6-2Q5R1I4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.96■□□□□ 0.31
Trav6-2Q5R1I4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-2Q5R1I4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav6-2Q5R1I4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav6-2Q5R1I4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-2Q5R1I4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav6-2Q5R1I4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-2Q5R1I4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-2Q5R1I4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-2Q5R1I4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trav6-2Q5R1I4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
Trav6-2Q5R1I4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-2Q5R1I4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav6-2Q5R1I4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-2Q5R1I4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-2Q5R1I4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-2Q5R1I4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-2Q5R1I4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-2Q5R1I4 Gm7860-201ENSMUST00000121190 879 ntBASIC16.94■□□□□ 0.3
Trav6-2Q5R1I4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.94■□□□□ 0.3
Trav6-2Q5R1I4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav6-2Q5R1I4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-2Q5R1I4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-2Q5R1I4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav6-2Q5R1I4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-2Q5R1I4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-2Q5R1I4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-2Q5R1I4 Gm13148-201ENSMUST00000118892 745 ntBASIC16.93■□□□□ 0.3
Trav6-2Q5R1I4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.93■□□□□ 0.3
Trav6-2Q5R1I4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-2Q5R1I4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-2Q5R1I4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-2Q5R1I4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-2Q5R1I4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-2Q5R1I4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-2Q5R1I4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-2Q5R1I4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-2Q5R1I4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.92■□□□□ 0.3
Trav6-2Q5R1I4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms