Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Gm11687-201ENSMUST00000118911 886 ntBASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav7d-4Q5R1H9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7d-4Q5R1H9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7d-4Q5R1H9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7d-4Q5R1H9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7d-4Q5R1H9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav7d-4Q5R1H9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav7d-4Q5R1H9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav7d-4Q5R1H9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7d-4Q5R1H9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav7d-4Q5R1H9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav7d-4Q5R1H9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.71□□□□□ -0.06
Trav7d-4Q5R1H9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7d-4Q5R1H9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7d-4Q5R1H9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7d-4Q5R1H9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7d-4Q5R1H9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav7d-4Q5R1H9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7d-4Q5R1H9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7d-4Q5R1H9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav7d-4Q5R1H9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7d-4Q5R1H9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7d-4Q5R1H9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7d-4Q5R1H9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7d-4Q5R1H9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav7d-4Q5R1H9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7d-4Q5R1H9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav7d-4Q5R1H9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-4Q5R1H9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-4Q5R1H9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-4Q5R1H9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-4Q5R1H9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav7d-4Q5R1H9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav7d-4Q5R1H9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.68□□□□□ -0.06
Trav7d-4Q5R1H9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-4Q5R1H9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-4Q5R1H9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-4Q5R1H9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-4Q5R1H9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7d-4Q5R1H9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav7d-4Q5R1H9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7d-4Q5R1H9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7d-4Q5R1H9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav7d-4Q5R1H9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7d-4Q5R1H9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7d-4Q5R1H9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav7d-4Q5R1H9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-4Q5R1H9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms