Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.19■□□□□ 0.98
Scarf1Q5ND28 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scarf1Q5ND28 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scarf1Q5ND28 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Scarf1Q5ND28 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Scarf1Q5ND28 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Scarf1Q5ND28 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.19■□□□□ 0.98
Scarf1Q5ND28 Reep4-203ENSMUST00000226563 1444 ntBASIC21.19■□□□□ 0.98
Scarf1Q5ND28 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Scarf1Q5ND28 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scarf1Q5ND28 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scarf1Q5ND28 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scarf1Q5ND28 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scarf1Q5ND28 Gm9988-201ENSMUST00000069786 435 ntBASIC21.18■□□□□ 0.98
Scarf1Q5ND28 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Scarf1Q5ND28 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scarf1Q5ND28 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scarf1Q5ND28 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scarf1Q5ND28 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scarf1Q5ND28 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Scarf1Q5ND28 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scarf1Q5ND28 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scarf1Q5ND28 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scarf1Q5ND28 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scarf1Q5ND28 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scarf1Q5ND28 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scarf1Q5ND28 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.17■□□□□ 0.98
Scarf1Q5ND28 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scarf1Q5ND28 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Scarf1Q5ND28 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.17■□□□□ 0.98
Scarf1Q5ND28 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.17■□□□□ 0.98
Scarf1Q5ND28 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scarf1Q5ND28 Notumos-201ENSMUST00000151998 2659 ntBASIC21.17■□□□□ 0.98
Scarf1Q5ND28 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scarf1Q5ND28 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Scarf1Q5ND28 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Scarf1Q5ND28 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scarf1Q5ND28 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.16■□□□□ 0.98
Scarf1Q5ND28 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.16■□□□□ 0.98
Scarf1Q5ND28 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scarf1Q5ND28 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scarf1Q5ND28 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
Scarf1Q5ND28 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scarf1Q5ND28 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scarf1Q5ND28 Gm38205-201ENSMUST00000192243 258 ntBASIC21.15■□□□□ 0.98
Scarf1Q5ND28 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.15■□□□□ 0.98
Scarf1Q5ND28 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scarf1Q5ND28 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Scarf1Q5ND28 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scarf1Q5ND28 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.14■□□□□ 0.97
Scarf1Q5ND28 Gm26571-201ENSMUST00000181399 666 ntBASIC21.14■□□□□ 0.97
Scarf1Q5ND28 Gm10033-202ENSMUST00000211874 928 ntBASIC21.14■□□□□ 0.97
Scarf1Q5ND28 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.14■□□□□ 0.97
Scarf1Q5ND28 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scarf1Q5ND28 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.14■□□□□ 0.97
Scarf1Q5ND28 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Scarf1Q5ND28 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.14■□□□□ 0.97
Scarf1Q5ND28 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Scarf1Q5ND28 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scarf1Q5ND28 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Scarf1Q5ND28 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Scarf1Q5ND28 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.13■□□□□ 0.97
Scarf1Q5ND28 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scarf1Q5ND28 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Scarf1Q5ND28 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scarf1Q5ND28 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scarf1Q5ND28 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Scarf1Q5ND28 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scarf1Q5ND28 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Scarf1Q5ND28 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scarf1Q5ND28 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scarf1Q5ND28 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Scarf1Q5ND28 Gm7860-201ENSMUST00000121190 879 ntBASIC21.11■□□□□ 0.97
Scarf1Q5ND28 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scarf1Q5ND28 Gm42642-201ENSMUST00000200683 355 ntBASIC21.11■□□□□ 0.97
Scarf1Q5ND28 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scarf1Q5ND28 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scarf1Q5ND28 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scarf1Q5ND28 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scarf1Q5ND28 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scarf1Q5ND28 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scarf1Q5ND28 Gm13234-201ENSMUST00000120010 747 ntBASIC21.1■□□□□ 0.97
Scarf1Q5ND28 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scarf1Q5ND28 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.1■□□□□ 0.97
Scarf1Q5ND28 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms