Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps13aQ5H8C4 Mir1199-201ENSMUST00000117015 119 ntBASIC19.45■□□□□ 0.7
Vps13aQ5H8C4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps13aQ5H8C4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps13aQ5H8C4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps13aQ5H8C4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps13aQ5H8C4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.44■□□□□ 0.7
Vps13aQ5H8C4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps13aQ5H8C4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps13aQ5H8C4 Dio3-201ENSMUST00000097228 1449 ntBASIC19.44■□□□□ 0.7
Vps13aQ5H8C4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps13aQ5H8C4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Vps13aQ5H8C4 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.44■□□□□ 0.7
Vps13aQ5H8C4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Vps13aQ5H8C4 Gm27741-201ENSMUST00000185060 237 ntBASIC19.44■□□□□ 0.7
Vps13aQ5H8C4 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.44■□□□□ 0.7
Vps13aQ5H8C4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps13aQ5H8C4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps13aQ5H8C4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps13aQ5H8C4 Rab3c-203ENSMUST00000224180 967 ntBASIC19.43■□□□□ 0.7
Vps13aQ5H8C4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps13aQ5H8C4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Vps13aQ5H8C4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.43■□□□□ 0.7
Vps13aQ5H8C4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.43■□□□□ 0.7
Vps13aQ5H8C4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.43■□□□□ 0.7
Vps13aQ5H8C4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps13aQ5H8C4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps13aQ5H8C4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps13aQ5H8C4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps13aQ5H8C4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Vps13aQ5H8C4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps13aQ5H8C4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps13aQ5H8C4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps13aQ5H8C4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Vps13aQ5H8C4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps13aQ5H8C4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps13aQ5H8C4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps13aQ5H8C4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Vps13aQ5H8C4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps13aQ5H8C4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps13aQ5H8C4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps13aQ5H8C4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps13aQ5H8C4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps13aQ5H8C4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps13aQ5H8C4 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.41■□□□□ 0.7
Vps13aQ5H8C4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.41■□□□□ 0.7
Vps13aQ5H8C4 Gm7367-201ENSMUST00000057611 492 ntBASIC19.41■□□□□ 0.7
Vps13aQ5H8C4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Vps13aQ5H8C4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps13aQ5H8C4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps13aQ5H8C4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps13aQ5H8C4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps13aQ5H8C4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps13aQ5H8C4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Vps13aQ5H8C4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps13aQ5H8C4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Vps13aQ5H8C4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps13aQ5H8C4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vps13aQ5H8C4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps13aQ5H8C4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps13aQ5H8C4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.39■□□□□ 0.69
Vps13aQ5H8C4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.39■□□□□ 0.69
Vps13aQ5H8C4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Vps13aQ5H8C4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps13aQ5H8C4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Vps13aQ5H8C4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.38■□□□□ 0.69
Vps13aQ5H8C4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps13aQ5H8C4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps13aQ5H8C4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps13aQ5H8C4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps13aQ5H8C4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 Gm2559-201ENSMUST00000201323 363 ntBASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 Gm43799-201ENSMUST00000201845 579 ntBASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps13aQ5H8C4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps13aQ5H8C4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps13aQ5H8C4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps13aQ5H8C4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps13aQ5H8C4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.36■□□□□ 0.69
Vps13aQ5H8C4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps13aQ5H8C4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps13aQ5H8C4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.36■□□□□ 0.69
Vps13aQ5H8C4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps13aQ5H8C4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms