Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Syne3Q4FZC9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Syne3Q4FZC9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Syne3Q4FZC9 Gm12251-201ENSMUST00000117893 792 ntBASIC20.42■□□□□ 0.86
Syne3Q4FZC9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Syne3Q4FZC9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.42■□□□□ 0.86
Syne3Q4FZC9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Syne3Q4FZC9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Syne3Q4FZC9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.42■□□□□ 0.86
Syne3Q4FZC9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Syne3Q4FZC9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Syne3Q4FZC9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syne3Q4FZC9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syne3Q4FZC9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syne3Q4FZC9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syne3Q4FZC9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
Syne3Q4FZC9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syne3Q4FZC9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syne3Q4FZC9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syne3Q4FZC9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syne3Q4FZC9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Syne3Q4FZC9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syne3Q4FZC9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Syne3Q4FZC9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Syne3Q4FZC9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syne3Q4FZC9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syne3Q4FZC9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syne3Q4FZC9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syne3Q4FZC9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.39■□□□□ 0.85
Syne3Q4FZC9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syne3Q4FZC9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.39■□□□□ 0.85
Syne3Q4FZC9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Syne3Q4FZC9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syne3Q4FZC9 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.39■□□□□ 0.85
Syne3Q4FZC9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syne3Q4FZC9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syne3Q4FZC9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syne3Q4FZC9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Syne3Q4FZC9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Syne3Q4FZC9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Syne3Q4FZC9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.38■□□□□ 0.85
Syne3Q4FZC9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Syne3Q4FZC9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Syne3Q4FZC9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Syne3Q4FZC9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.38■□□□□ 0.85
Syne3Q4FZC9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Gm43017-201ENSMUST00000198296 752 ntBASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Gm43173-201ENSMUST00000202246 593 ntBASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Syne3Q4FZC9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Syne3Q4FZC9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.36■□□□□ 0.85
Syne3Q4FZC9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Syne3Q4FZC9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syne3Q4FZC9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syne3Q4FZC9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Syne3Q4FZC9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.36■□□□□ 0.85
Syne3Q4FZC9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.36■□□□□ 0.85
Syne3Q4FZC9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.36■□□□□ 0.85
Syne3Q4FZC9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Syne3Q4FZC9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Syne3Q4FZC9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syne3Q4FZC9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Syne3Q4FZC9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Syne3Q4FZC9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syne3Q4FZC9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Syne3Q4FZC9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syne3Q4FZC9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
Syne3Q4FZC9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syne3Q4FZC9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syne3Q4FZC9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syne3Q4FZC9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Syne3Q4FZC9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syne3Q4FZC9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms