Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn4Q3UWL8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn4Q3UWL8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn4Q3UWL8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn4Q3UWL8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.82■□□□□ 0.6
Pfdn4Q3UWL8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn4Q3UWL8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn4Q3UWL8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Pfdn4Q3UWL8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn4Q3UWL8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn4Q3UWL8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.82■□□□□ 0.6
Pfdn4Q3UWL8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn4Q3UWL8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pfdn4Q3UWL8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn4Q3UWL8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn4Q3UWL8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn4Q3UWL8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pfdn4Q3UWL8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.81■□□□□ 0.6
Pfdn4Q3UWL8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Pfdn4Q3UWL8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn4Q3UWL8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn4Q3UWL8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn4Q3UWL8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn4Q3UWL8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn4Q3UWL8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn4Q3UWL8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn4Q3UWL8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn4Q3UWL8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn4Q3UWL8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn4Q3UWL8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pfdn4Q3UWL8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn4Q3UWL8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.79■□□□□ 0.6
Pfdn4Q3UWL8 Gm9959-201ENSMUST00000068277 390 ntBASIC18.79■□□□□ 0.6
Pfdn4Q3UWL8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn4Q3UWL8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn4Q3UWL8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn4Q3UWL8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pfdn4Q3UWL8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pfdn4Q3UWL8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.78■□□□□ 0.6
Pfdn4Q3UWL8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn4Q3UWL8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn4Q3UWL8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn4Q3UWL8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn4Q3UWL8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pfdn4Q3UWL8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn4Q3UWL8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn4Q3UWL8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn4Q3UWL8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Pfdn4Q3UWL8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pfdn4Q3UWL8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Pfdn4Q3UWL8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn4Q3UWL8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn4Q3UWL8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn4Q3UWL8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn4Q3UWL8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn4Q3UWL8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn4Q3UWL8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn4Q3UWL8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn4Q3UWL8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn4Q3UWL8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pfdn4Q3UWL8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pfdn4Q3UWL8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pfdn4Q3UWL8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pfdn4Q3UWL8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pfdn4Q3UWL8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Pfdn4Q3UWL8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pfdn4Q3UWL8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn4Q3UWL8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn4Q3UWL8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
Pfdn4Q3UWL8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.76■□□□□ 0.59
Pfdn4Q3UWL8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn4Q3UWL8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn4Q3UWL8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn4Q3UWL8 AA386476-201ENSMUST00000098781 1665 ntBASIC18.76■□□□□ 0.59
Pfdn4Q3UWL8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pfdn4Q3UWL8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pfdn4Q3UWL8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pfdn4Q3UWL8 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.75■□□□□ 0.59
Pfdn4Q3UWL8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms