Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cnga4Q3UW12 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cnga4Q3UW12 BC021767-201ENSMUST00000126387 1716 ntBASIC19.56■□□□□ 0.72
Cnga4Q3UW12 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cnga4Q3UW12 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cnga4Q3UW12 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cnga4Q3UW12 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.56■□□□□ 0.72
Cnga4Q3UW12 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.56■□□□□ 0.72
Cnga4Q3UW12 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cnga4Q3UW12 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Cnga4Q3UW12 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cnga4Q3UW12 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cnga4Q3UW12 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.56■□□□□ 0.72
Cnga4Q3UW12 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.56■□□□□ 0.72
Cnga4Q3UW12 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cnga4Q3UW12 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cnga4Q3UW12 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cnga4Q3UW12 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cnga4Q3UW12 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cnga4Q3UW12 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cnga4Q3UW12 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
Cnga4Q3UW12 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cnga4Q3UW12 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.55■□□□□ 0.72
Cnga4Q3UW12 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cnga4Q3UW12 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.55■□□□□ 0.72
Cnga4Q3UW12 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cnga4Q3UW12 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cnga4Q3UW12 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cnga4Q3UW12 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cnga4Q3UW12 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cnga4Q3UW12 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cnga4Q3UW12 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Cnga4Q3UW12 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cnga4Q3UW12 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cnga4Q3UW12 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cnga4Q3UW12 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Cnga4Q3UW12 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cnga4Q3UW12 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cnga4Q3UW12 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cnga4Q3UW12 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cnga4Q3UW12 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cnga4Q3UW12 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cnga4Q3UW12 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cnga4Q3UW12 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cnga4Q3UW12 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cnga4Q3UW12 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cnga4Q3UW12 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cnga4Q3UW12 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.53■□□□□ 0.72
Cnga4Q3UW12 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.53■□□□□ 0.72
Cnga4Q3UW12 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Cnga4Q3UW12 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cnga4Q3UW12 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cnga4Q3UW12 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cnga4Q3UW12 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.52■□□□□ 0.72
Cnga4Q3UW12 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.52■□□□□ 0.72
Cnga4Q3UW12 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Cnga4Q3UW12 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cnga4Q3UW12 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cnga4Q3UW12 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.52■□□□□ 0.72
Cnga4Q3UW12 Gm10232-201ENSMUST00000089221 720 ntBASIC19.52■□□□□ 0.72
Cnga4Q3UW12 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cnga4Q3UW12 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cnga4Q3UW12 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Cnga4Q3UW12 AA386476-201ENSMUST00000098781 1665 ntBASIC19.52■□□□□ 0.71
Cnga4Q3UW12 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Cnga4Q3UW12 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Cnga4Q3UW12 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cnga4Q3UW12 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.51■□□□□ 0.71
Cnga4Q3UW12 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cnga4Q3UW12 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.51■□□□□ 0.71
Cnga4Q3UW12 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cnga4Q3UW12 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cnga4Q3UW12 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cnga4Q3UW12 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cnga4Q3UW12 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cnga4Q3UW12 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cnga4Q3UW12 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cnga4Q3UW12 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cnga4Q3UW12 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cnga4Q3UW12 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Cnga4Q3UW12 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cnga4Q3UW12 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Cnga4Q3UW12 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.5■□□□□ 0.71
Cnga4Q3UW12 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cnga4Q3UW12 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.5■□□□□ 0.71
Cnga4Q3UW12 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Cnga4Q3UW12 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cnga4Q3UW12 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cnga4Q3UW12 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.49■□□□□ 0.71
Cnga4Q3UW12 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cnga4Q3UW12 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cnga4Q3UW12 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Cnga4Q3UW12 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cnga4Q3UW12 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cnga4Q3UW12 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.49■□□□□ 0.71
Cnga4Q3UW12 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.49■□□□□ 0.71
Cnga4Q3UW12 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cnga4Q3UW12 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cnga4Q3UW12 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cnga4Q3UW12 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms