Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf223Q3UV31 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf223Q3UV31 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf223Q3UV31 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.78■□□□□ 0.6
Rnf223Q3UV31 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf223Q3UV31 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf223Q3UV31 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rnf223Q3UV31 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf223Q3UV31 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf223Q3UV31 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf223Q3UV31 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf223Q3UV31 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf223Q3UV31 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rnf223Q3UV31 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf223Q3UV31 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf223Q3UV31 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf223Q3UV31 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf223Q3UV31 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf223Q3UV31 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Rnf223Q3UV31 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.77■□□□□ 0.6
Rnf223Q3UV31 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf223Q3UV31 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf223Q3UV31 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf223Q3UV31 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rnf223Q3UV31 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rnf223Q3UV31 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Rnf223Q3UV31 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rnf223Q3UV31 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Rnf223Q3UV31 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf223Q3UV31 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf223Q3UV31 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf223Q3UV31 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf223Q3UV31 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf223Q3UV31 Gm7860-201ENSMUST00000121190 879 ntBASIC18.76■□□□□ 0.59
Rnf223Q3UV31 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf223Q3UV31 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf223Q3UV31 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf223Q3UV31 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf223Q3UV31 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf223Q3UV31 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf223Q3UV31 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rnf223Q3UV31 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf223Q3UV31 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rnf223Q3UV31 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf223Q3UV31 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf223Q3UV31 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf223Q3UV31 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf223Q3UV31 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.75■□□□□ 0.59
Rnf223Q3UV31 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf223Q3UV31 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf223Q3UV31 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.75■□□□□ 0.59
Rnf223Q3UV31 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf223Q3UV31 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf223Q3UV31 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf223Q3UV31 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf223Q3UV31 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rnf223Q3UV31 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.73■□□□□ 0.59
Rnf223Q3UV31 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rnf223Q3UV31 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf223Q3UV31 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf223Q3UV31 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf223Q3UV31 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf223Q3UV31 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf223Q3UV31 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf223Q3UV31 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf223Q3UV31 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.72■□□□□ 0.59
Rnf223Q3UV31 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.72■□□□□ 0.59
Rnf223Q3UV31 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf223Q3UV31 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf223Q3UV31 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf223Q3UV31 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Rnf223Q3UV31 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf223Q3UV31 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf223Q3UV31 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf223Q3UV31 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf223Q3UV31 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Rnf223Q3UV31 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.71■□□□□ 0.59
Rnf223Q3UV31 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf223Q3UV31 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rnf223Q3UV31 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Rnf223Q3UV31 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf223Q3UV31 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf223Q3UV31 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf223Q3UV31 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms