Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm29609Q3UU56 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm29609Q3UU56 Gm12441-201ENSMUST00000121806 588 ntBASIC20.27■□□□□ 0.84
Gm29609Q3UU56 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.27■□□□□ 0.84
Gm29609Q3UU56 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm29609Q3UU56 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm29609Q3UU56 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Gm29609Q3UU56 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm29609Q3UU56 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.27■□□□□ 0.83
Gm29609Q3UU56 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm29609Q3UU56 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm29609Q3UU56 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm29609Q3UU56 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm29609Q3UU56 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.26■□□□□ 0.83
Gm29609Q3UU56 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm29609Q3UU56 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm29609Q3UU56 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.26■□□□□ 0.83
Gm29609Q3UU56 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Gm29609Q3UU56 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm29609Q3UU56 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm29609Q3UU56 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Gm29609Q3UU56 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Gm29609Q3UU56 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.26■□□□□ 0.83
Gm29609Q3UU56 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm29609Q3UU56 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Gm29609Q3UU56 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.25■□□□□ 0.83
Gm29609Q3UU56 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm29609Q3UU56 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.25■□□□□ 0.83
Gm29609Q3UU56 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.25■□□□□ 0.83
Gm29609Q3UU56 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm29609Q3UU56 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.25■□□□□ 0.83
Gm29609Q3UU56 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.25■□□□□ 0.83
Gm29609Q3UU56 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm29609Q3UU56 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Gm29609Q3UU56 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Gm29609Q3UU56 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Gm29609Q3UU56 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm29609Q3UU56 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm29609Q3UU56 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Gm29609Q3UU56 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Gm29609Q3UU56 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Gm29609Q3UU56 Gm20760-201ENSMUST00000179197 648 ntBASIC20.24■□□□□ 0.83
Gm29609Q3UU56 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
Gm29609Q3UU56 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.24■□□□□ 0.83
Gm29609Q3UU56 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm29609Q3UU56 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Gm29609Q3UU56 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Gm29609Q3UU56 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm29609Q3UU56 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm29609Q3UU56 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm29609Q3UU56 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm29609Q3UU56 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm29609Q3UU56 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm29609Q3UU56 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm29609Q3UU56 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm29609Q3UU56 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm29609Q3UU56 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.23■□□□□ 0.83
Gm29609Q3UU56 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm29609Q3UU56 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Gm29609Q3UU56 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm29609Q3UU56 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Gm29609Q3UU56 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm29609Q3UU56 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm29609Q3UU56 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.22■□□□□ 0.83
Gm29609Q3UU56 Mir6236-201ENSMUST00000184437 123 ntBASIC20.22■□□□□ 0.83
Gm29609Q3UU56 Gm8520-201ENSMUST00000186517 868 ntBASIC20.22■□□□□ 0.83
Gm29609Q3UU56 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.22■□□□□ 0.83
Gm29609Q3UU56 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Gm29609Q3UU56 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm29609Q3UU56 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm29609Q3UU56 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm29609Q3UU56 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm29609Q3UU56 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.21■□□□□ 0.83
Gm29609Q3UU56 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm29609Q3UU56 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.21■□□□□ 0.83
Gm29609Q3UU56 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.21■□□□□ 0.83
Gm29609Q3UU56 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.21■□□□□ 0.83
Gm29609Q3UU56 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm29609Q3UU56 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm29609Q3UU56 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm29609Q3UU56 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm29609Q3UU56 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Gm29609Q3UU56 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
Gm29609Q3UU56 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm29609Q3UU56 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm29609Q3UU56 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.2■□□□□ 0.82
Gm29609Q3UU56 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm29609Q3UU56 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm29609Q3UU56 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm29609Q3UU56 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm29609Q3UU56 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm29609Q3UU56 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm29609Q3UU56 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm29609Q3UU56 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm29609Q3UU56 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm29609Q3UU56 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm29609Q3UU56 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm29609Q3UU56 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.19■□□□□ 0.82
Gm29609Q3UU56 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Gm29609Q3UU56 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms