Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Gm5408-201ENSMUST00000197998 747 ntBASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnrc6aQ3UHK8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Tnrc6aQ3UHK8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.99■□□□□ 0.47
Tnrc6aQ3UHK8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnrc6aQ3UHK8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Tnrc6aQ3UHK8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnrc6aQ3UHK8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Tnrc6aQ3UHK8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnrc6aQ3UHK8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Tnrc6aQ3UHK8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Tnrc6aQ3UHK8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnrc6aQ3UHK8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.99■□□□□ 0.47
Tnrc6aQ3UHK8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnrc6aQ3UHK8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.99■□□□□ 0.47
Tnrc6aQ3UHK8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tnrc6aQ3UHK8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnrc6aQ3UHK8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnrc6aQ3UHK8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Tnrc6aQ3UHK8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnrc6aQ3UHK8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.98■□□□□ 0.47
Tnrc6aQ3UHK8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.98■□□□□ 0.47
Tnrc6aQ3UHK8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tnrc6aQ3UHK8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnrc6aQ3UHK8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc6aQ3UHK8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc6aQ3UHK8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc6aQ3UHK8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.97■□□□□ 0.47
Tnrc6aQ3UHK8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.97■□□□□ 0.47
Tnrc6aQ3UHK8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.97■□□□□ 0.47
Tnrc6aQ3UHK8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc6aQ3UHK8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc6aQ3UHK8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc6aQ3UHK8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Tnrc6aQ3UHK8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc6aQ3UHK8 Gm6365-201ENSMUST00000054711 744 ntBASIC17.97■□□□□ 0.47
Tnrc6aQ3UHK8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc6aQ3UHK8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnrc6aQ3UHK8 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.97■□□□□ 0.47
Tnrc6aQ3UHK8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc6aQ3UHK8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc6aQ3UHK8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc6aQ3UHK8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.96■□□□□ 0.47
Tnrc6aQ3UHK8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc6aQ3UHK8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc6aQ3UHK8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc6aQ3UHK8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc6aQ3UHK8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc6aQ3UHK8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnrc6aQ3UHK8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc6aQ3UHK8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc6aQ3UHK8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc6aQ3UHK8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc6aQ3UHK8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc6aQ3UHK8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc6aQ3UHK8 Gm20049-201ENSMUST00000219950 730 ntBASIC17.95■□□□□ 0.46
Tnrc6aQ3UHK8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnrc6aQ3UHK8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnrc6aQ3UHK8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Tnrc6aQ3UHK8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Tnrc6aQ3UHK8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnrc6aQ3UHK8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Tnrc6aQ3UHK8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnrc6aQ3UHK8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Tnrc6aQ3UHK8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc6aQ3UHK8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc6aQ3UHK8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc6aQ3UHK8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc6aQ3UHK8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnrc6aQ3UHK8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.93■□□□□ 0.46
Tnrc6aQ3UHK8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms