Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Snx27Q3UHD6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Snx27Q3UHD6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.93■□□□□ 0.94
Snx27Q3UHD6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Snx27Q3UHD6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Snx27Q3UHD6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Snx27Q3UHD6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Snx27Q3UHD6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.92■□□□□ 0.94
Snx27Q3UHD6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Snx27Q3UHD6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Snx27Q3UHD6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Snx27Q3UHD6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.92■□□□□ 0.94
Snx27Q3UHD6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Snx27Q3UHD6 Gm10602-201ENSMUST00000098239 609 ntBASIC20.92■□□□□ 0.94
Snx27Q3UHD6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Snx27Q3UHD6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Snx27Q3UHD6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Snx27Q3UHD6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Snx27Q3UHD6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Snx27Q3UHD6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Snx27Q3UHD6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Snx27Q3UHD6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Snx27Q3UHD6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Snx27Q3UHD6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Snx27Q3UHD6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Snx27Q3UHD6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx27Q3UHD6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx27Q3UHD6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx27Q3UHD6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Snx27Q3UHD6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Snx27Q3UHD6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Snx27Q3UHD6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.9■□□□□ 0.94
Snx27Q3UHD6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Snx27Q3UHD6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Snx27Q3UHD6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Snx27Q3UHD6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Snx27Q3UHD6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Snx27Q3UHD6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Snx27Q3UHD6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.89■□□□□ 0.93
Snx27Q3UHD6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Snx27Q3UHD6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Snx27Q3UHD6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Snx27Q3UHD6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Snx27Q3UHD6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Snx27Q3UHD6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Snx27Q3UHD6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.88■□□□□ 0.93
Snx27Q3UHD6 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.88■□□□□ 0.93
Snx27Q3UHD6 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.88■□□□□ 0.93
Snx27Q3UHD6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Snx27Q3UHD6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.88■□□□□ 0.93
Snx27Q3UHD6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Snx27Q3UHD6 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.88■□□□□ 0.93
Snx27Q3UHD6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Snx27Q3UHD6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Snx27Q3UHD6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Snx27Q3UHD6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Snx27Q3UHD6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Snx27Q3UHD6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.88■□□□□ 0.93
Snx27Q3UHD6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Snx27Q3UHD6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Snx27Q3UHD6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
Snx27Q3UHD6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.87■□□□□ 0.93
Snx27Q3UHD6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Snx27Q3UHD6 Gm6420-201ENSMUST00000193885 723 ntBASIC20.87■□□□□ 0.93
Snx27Q3UHD6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Snx27Q3UHD6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Snx27Q3UHD6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Snx27Q3UHD6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Snx27Q3UHD6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx27Q3UHD6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx27Q3UHD6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Snx27Q3UHD6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.86■□□□□ 0.93
Snx27Q3UHD6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx27Q3UHD6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
Snx27Q3UHD6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx27Q3UHD6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx27Q3UHD6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Snx27Q3UHD6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx27Q3UHD6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx27Q3UHD6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx27Q3UHD6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx27Q3UHD6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx27Q3UHD6 Nespas-201ENSMUST00000143738 1083 ntBASIC20.85■□□□□ 0.93
Snx27Q3UHD6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.85■□□□□ 0.93
Snx27Q3UHD6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.85■□□□□ 0.93
Snx27Q3UHD6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Snx27Q3UHD6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx27Q3UHD6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Snx27Q3UHD6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx27Q3UHD6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx27Q3UHD6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx27Q3UHD6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx27Q3UHD6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Snx27Q3UHD6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx27Q3UHD6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Snx27Q3UHD6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx27Q3UHD6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Snx27Q3UHD6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx27Q3UHD6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx27Q3UHD6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms