Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Spg11Q3UHA3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Spg11Q3UHA3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Spg11Q3UHA3 Gm9103-201ENSMUST00000119371 405 ntBASIC18.07■□□□□ 0.48
Spg11Q3UHA3 Gm6345-202ENSMUST00000180900 204 ntBASIC18.07■□□□□ 0.48
Spg11Q3UHA3 Gm33142-201ENSMUST00000193913 867 ntBASIC18.07■□□□□ 0.48
Spg11Q3UHA3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Spg11Q3UHA3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Spg11Q3UHA3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Spg11Q3UHA3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Spg11Q3UHA3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Spg11Q3UHA3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.06■□□□□ 0.48
Spg11Q3UHA3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.06■□□□□ 0.48
Spg11Q3UHA3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Spg11Q3UHA3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Spg11Q3UHA3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Spg11Q3UHA3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Spg11Q3UHA3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Spg11Q3UHA3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Spg11Q3UHA3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Spg11Q3UHA3 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.05■□□□□ 0.48
Spg11Q3UHA3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Spg11Q3UHA3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Spg11Q3UHA3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Spg11Q3UHA3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Spg11Q3UHA3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Spg11Q3UHA3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Spg11Q3UHA3 Gm13158-201ENSMUST00000122007 736 ntBASIC18.04■□□□□ 0.48
Spg11Q3UHA3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Spg11Q3UHA3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Spg11Q3UHA3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Spg11Q3UHA3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.04■□□□□ 0.48
Spg11Q3UHA3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Spg11Q3UHA3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Spg11Q3UHA3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Spg11Q3UHA3 Gm10013-201ENSMUST00000106074 672 ntBASIC18.03■□□□□ 0.48
Spg11Q3UHA3 Gm13559-201ENSMUST00000120476 863 ntBASIC18.03■□□□□ 0.48
Spg11Q3UHA3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.03■□□□□ 0.48
Spg11Q3UHA3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.03■□□□□ 0.48
Spg11Q3UHA3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Spg11Q3UHA3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Spg11Q3UHA3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.03■□□□□ 0.48
Spg11Q3UHA3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Spg11Q3UHA3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.03■□□□□ 0.48
Spg11Q3UHA3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.03■□□□□ 0.48
Spg11Q3UHA3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Spg11Q3UHA3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Spg11Q3UHA3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Spg11Q3UHA3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Spg11Q3UHA3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Spg11Q3UHA3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Spg11Q3UHA3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Spg11Q3UHA3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Spg11Q3UHA3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.02■□□□□ 0.47
Spg11Q3UHA3 Gm11539-201ENSMUST00000119837 557 ntBASIC18.02■□□□□ 0.47
Spg11Q3UHA3 Gm13436-201ENSMUST00000120418 567 ntBASIC18.02■□□□□ 0.47
Spg11Q3UHA3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.02■□□□□ 0.47
Spg11Q3UHA3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Spg11Q3UHA3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Spg11Q3UHA3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Gm30025-201ENSMUST00000218555 728 ntBASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Spg11Q3UHA3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Spg11Q3UHA3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Spg11Q3UHA3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18■□□□□ 0.47
Spg11Q3UHA3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18■□□□□ 0.47
Spg11Q3UHA3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18■□□□□ 0.47
Spg11Q3UHA3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Spg11Q3UHA3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18■□□□□ 0.47
Spg11Q3UHA3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Spg11Q3UHA3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Spg11Q3UHA3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Spg11Q3UHA3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Spg11Q3UHA3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Spg11Q3UHA3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Spg11Q3UHA3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Spg11Q3UHA3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Spg11Q3UHA3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Spg11Q3UHA3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.99■□□□□ 0.47
Spg11Q3UHA3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Spg11Q3UHA3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Spg11Q3UHA3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms