Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Fndc4Q3TR08 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Fndc4Q3TR08 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Fndc4Q3TR08 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.35■□□□□ 0.21
Fndc4Q3TR08 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Fndc4Q3TR08 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Fndc4Q3TR08 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Fndc4Q3TR08 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.35■□□□□ 0.21
Fndc4Q3TR08 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Fndc4Q3TR08 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Fndc4Q3TR08 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Fndc4Q3TR08 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Fndc4Q3TR08 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Fndc4Q3TR08 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Fndc4Q3TR08 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Fndc4Q3TR08 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Fndc4Q3TR08 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Fndc4Q3TR08 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Fndc4Q3TR08 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
Fndc4Q3TR08 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Fndc4Q3TR08 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Fndc4Q3TR08 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Fndc4Q3TR08 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Fndc4Q3TR08 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Fndc4Q3TR08 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fndc4Q3TR08 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fndc4Q3TR08 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Fndc4Q3TR08 Gm43530-201ENSMUST00000195920 274 ntBASIC16.33■□□□□ 0.2
Fndc4Q3TR08 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fndc4Q3TR08 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Fndc4Q3TR08 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Fndc4Q3TR08 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Fndc4Q3TR08 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fndc4Q3TR08 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Fndc4Q3TR08 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fndc4Q3TR08 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fndc4Q3TR08 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Fndc4Q3TR08 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fndc4Q3TR08 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fndc4Q3TR08 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Gm12922-201ENSMUST00000120626 809 ntBASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fndc4Q3TR08 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Fndc4Q3TR08 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fndc4Q3TR08 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.3■□□□□ 0.2
Fndc4Q3TR08 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fndc4Q3TR08 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fndc4Q3TR08 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.3■□□□□ 0.2
Fndc4Q3TR08 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms