Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Gm18032-201ENSMUST00000222541 538 ntBASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ush2AQ2QI47 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ush2AQ2QI47 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.55□□□□□ -0.72
Ush2AQ2QI47 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Ush2AQ2QI47 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ush2AQ2QI47 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ush2AQ2QI47 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ush2AQ2QI47 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ush2AQ2QI47 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Ush2AQ2QI47 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ush2AQ2QI47 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ush2AQ2QI47 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ush2AQ2QI47 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ush2AQ2QI47 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ush2AQ2QI47 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ush2AQ2QI47 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ush2AQ2QI47 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ush2AQ2QI47 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ush2AQ2QI47 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ush2AQ2QI47 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Ush2AQ2QI47 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ush2AQ2QI47 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC10.54□□□□□ -0.72
Ush2AQ2QI47 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ush2AQ2QI47 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ush2AQ2QI47 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ush2AQ2QI47 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ush2AQ2QI47 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ush2AQ2QI47 AC159205.6-201ENSMUST00000224935 887 ntBASIC10.54□□□□□ -0.72
Ush2AQ2QI47 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Gm5712-201ENSMUST00000199748 1043 ntBASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Gm16042-201ENSMUST00000204813 1247 ntBASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 AC131586.2-201ENSMUST00000228370 1512 ntBASIC10.53□□□□□ -0.72
Ush2AQ2QI47 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Gm7153-201ENSMUST00000117092 455 ntBASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ush2AQ2QI47 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.72
Ush2AQ2QI47 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC10.52□□□□□ -0.72
Ush2AQ2QI47 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ush2AQ2QI47 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ush2AQ2QI47 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ush2AQ2QI47 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ush2AQ2QI47 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ush2AQ2QI47 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ush2AQ2QI47 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Ush2AQ2QI47 AC115037.1-201ENSMUST00000223391 2173 ntBASIC10.52□□□□□ -0.73
Ush2AQ2QI47 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ush2AQ2QI47 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ush2AQ2QI47 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC10.52□□□□□ -0.73
Ush2AQ2QI47 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ush2AQ2QI47 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ush2AQ2QI47 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ush2AQ2QI47 Gm6443-201ENSMUST00000203599 874 ntBASIC10.52□□□□□ -0.73
Ush2AQ2QI47 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ush2AQ2QI47 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Gm43183-201ENSMUST00000200632 547 ntBASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms