Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.55■□□□□ 0.4
Chd8Q09XV5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Chd8Q09XV5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.55■□□□□ 0.4
Chd8Q09XV5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chd8Q09XV5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd8Q09XV5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Chd8Q09XV5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chd8Q09XV5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd8Q09XV5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd8Q09XV5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd8Q09XV5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Gm13158-201ENSMUST00000122007 736 ntBASIC17.53■□□□□ 0.4
Chd8Q09XV5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Mzt1-203ENSMUST00000227948 952 ntBASIC17.53■□□□□ 0.4
Chd8Q09XV5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd8Q09XV5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Chd8Q09XV5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd8Q09XV5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd8Q09XV5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd8Q09XV5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Chd8Q09XV5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd8Q09XV5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Chd8Q09XV5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.52■□□□□ 0.39
Chd8Q09XV5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd8Q09XV5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd8Q09XV5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.51■□□□□ 0.39
Chd8Q09XV5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.51■□□□□ 0.39
Chd8Q09XV5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd8Q09XV5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Chd8Q09XV5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.51■□□□□ 0.39
Chd8Q09XV5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd8Q09XV5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd8Q09XV5 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.51■□□□□ 0.39
Chd8Q09XV5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Chd8Q09XV5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd8Q09XV5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd8Q09XV5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd8Q09XV5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chd8Q09XV5 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd8Q09XV5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.5■□□□□ 0.39
Chd8Q09XV5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.5■□□□□ 0.39
Chd8Q09XV5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd8Q09XV5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd8Q09XV5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd8Q09XV5 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.5■□□□□ 0.39
Chd8Q09XV5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd8Q09XV5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd8Q09XV5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Chd8Q09XV5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chd8Q09XV5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Chd8Q09XV5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd8Q09XV5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.49■□□□□ 0.39
Chd8Q09XV5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd8Q09XV5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd8Q09XV5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd8Q09XV5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd8Q09XV5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd8Q09XV5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd8Q09XV5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.49■□□□□ 0.39
Chd8Q09XV5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd8Q09XV5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.48■□□□□ 0.39
Chd8Q09XV5 Odf3b-204ENSMUST00000227834 930 ntBASIC17.48■□□□□ 0.39
Chd8Q09XV5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd8Q09XV5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd8Q09XV5 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.48■□□□□ 0.39
Chd8Q09XV5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.48■□□□□ 0.39
Chd8Q09XV5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Chd8Q09XV5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.48■□□□□ 0.39
Chd8Q09XV5 Gm25016-201ENSMUST00000158399 131 ntBASIC17.48■□□□□ 0.39
Chd8Q09XV5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chd8Q09XV5 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.48■□□□□ 0.39
Chd8Q09XV5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd8Q09XV5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Chd8Q09XV5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd8Q09XV5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd8Q09XV5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd8Q09XV5 Gm17661-201ENSMUST00000170317 270 ntBASIC17.47■□□□□ 0.39
Chd8Q09XV5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.47■□□□□ 0.39
Chd8Q09XV5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd8Q09XV5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.47■□□□□ 0.39
Chd8Q09XV5 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.47■□□□□ 0.39
Chd8Q09XV5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.47■□□□□ 0.39
Chd8Q09XV5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chd8Q09XV5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Chd8Q09XV5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.46■□□□□ 0.39
Chd8Q09XV5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chd8Q09XV5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms