Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ebf1Q07802 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.5■□□□□ 0.71
Ebf1Q07802 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ebf1Q07802 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ebf1Q07802 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf1Q07802 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf1Q07802 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf1Q07802 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf1Q07802 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf1Q07802 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.49■□□□□ 0.71
Ebf1Q07802 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf1Q07802 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.49■□□□□ 0.71
Ebf1Q07802 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.49■□□□□ 0.71
Ebf1Q07802 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.49■□□□□ 0.71
Ebf1Q07802 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ebf1Q07802 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf1Q07802 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf1Q07802 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ebf1Q07802 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf1Q07802 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf1Q07802 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf1Q07802 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ebf1Q07802 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Ebf1Q07802 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf1Q07802 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf1Q07802 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf1Q07802 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ebf1Q07802 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf1Q07802 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf1Q07802 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf1Q07802 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf1Q07802 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.48■□□□□ 0.71
Ebf1Q07802 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.48■□□□□ 0.71
Ebf1Q07802 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf1Q07802 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
Ebf1Q07802 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf1Q07802 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf1Q07802 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf1Q07802 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ebf1Q07802 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf1Q07802 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf1Q07802 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf1Q07802 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf1Q07802 Gm4968-201ENSMUST00000071458 858 ntBASIC19.47■□□□□ 0.71
Ebf1Q07802 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf1Q07802 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf1Q07802 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ebf1Q07802 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ebf1Q07802 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ebf1Q07802 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ebf1Q07802 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Ebf1Q07802 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.46■□□□□ 0.71
Ebf1Q07802 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ebf1Q07802 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ebf1Q07802 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ebf1Q07802 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ebf1Q07802 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ebf1Q07802 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ebf1Q07802 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.45■□□□□ 0.7
Ebf1Q07802 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Ebf1Q07802 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ebf1Q07802 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ebf1Q07802 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.44■□□□□ 0.7
Ebf1Q07802 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf1Q07802 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf1Q07802 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.44■□□□□ 0.7
Ebf1Q07802 Gm10653-202ENSMUST00000139570 835 ntBASIC19.44■□□□□ 0.7
Ebf1Q07802 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.44■□□□□ 0.7
Ebf1Q07802 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ebf1Q07802 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf1Q07802 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ebf1Q07802 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ebf1Q07802 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf1Q07802 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf1Q07802 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf1Q07802 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ebf1Q07802 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf1Q07802 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Ebf1Q07802 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf1Q07802 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf1Q07802 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf1Q07802 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf1Q07802 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ebf1Q07802 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf1Q07802 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf1Q07802 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf1Q07802 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.42■□□□□ 0.7
Ebf1Q07802 Gm20760-201ENSMUST00000179197 648 ntBASIC19.42■□□□□ 0.7
Ebf1Q07802 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ebf1Q07802 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.42■□□□□ 0.7
Ebf1Q07802 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf1Q07802 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf1Q07802 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf1Q07802 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf1Q07802 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf1Q07802 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ebf1Q07802 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf1Q07802 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ebf1Q07802 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ebf1Q07802 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms