Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox4Q06831 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox4Q06831 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox4Q06831 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.97■□□□□ 0.63
Sox4Q06831 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.97■□□□□ 0.63
Sox4Q06831 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sox4Q06831 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox4Q06831 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox4Q06831 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
Sox4Q06831 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.96■□□□□ 0.63
Sox4Q06831 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox4Q06831 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox4Q06831 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sox4Q06831 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox4Q06831 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox4Q06831 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sox4Q06831 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox4Q06831 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sox4Q06831 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sox4Q06831 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox4Q06831 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox4Q06831 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sox4Q06831 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sox4Q06831 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox4Q06831 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sox4Q06831 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.95■□□□□ 0.62
Sox4Q06831 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.95■□□□□ 0.62
Sox4Q06831 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox4Q06831 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Sox4Q06831 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox4Q06831 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox4Q06831 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox4Q06831 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.94■□□□□ 0.62
Sox4Q06831 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox4Q06831 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox4Q06831 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.94■□□□□ 0.62
Sox4Q06831 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox4Q06831 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.94■□□□□ 0.62
Sox4Q06831 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sox4Q06831 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox4Q06831 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox4Q06831 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox4Q06831 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sox4Q06831 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox4Q06831 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Sox4Q06831 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox4Q06831 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sox4Q06831 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox4Q06831 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox4Q06831 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox4Q06831 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox4Q06831 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox4Q06831 Reep4-203ENSMUST00000226563 1444 ntBASIC18.92■□□□□ 0.62
Sox4Q06831 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sox4Q06831 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox4Q06831 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sox4Q06831 Gm42642-201ENSMUST00000200683 355 ntBASIC18.92■□□□□ 0.62
Sox4Q06831 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox4Q06831 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sox4Q06831 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox4Q06831 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox4Q06831 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox4Q06831 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox4Q06831 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox4Q06831 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox4Q06831 Gm42778-201ENSMUST00000199644 553 ntBASIC18.91■□□□□ 0.62
Sox4Q06831 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox4Q06831 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.9■□□□□ 0.62
Sox4Q06831 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox4Q06831 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox4Q06831 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox4Q06831 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox4Q06831 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox4Q06831 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox4Q06831 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox4Q06831 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sox4Q06831 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sox4Q06831 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Sox4Q06831 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sox4Q06831 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox4Q06831 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.89■□□□□ 0.61
Sox4Q06831 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Sox4Q06831 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox4Q06831 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox4Q06831 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox4Q06831 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Sox4Q06831 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Sox4Q06831 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Sox4Q06831 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox4Q06831 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.88■□□□□ 0.61
Sox4Q06831 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox4Q06831 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox4Q06831 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox4Q06831 Gm26571-201ENSMUST00000181399 666 ntBASIC18.88■□□□□ 0.61
Sox4Q06831 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sox4Q06831 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.88■□□□□ 0.61
Sox4Q06831 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sox4Q06831 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox4Q06831 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sox4Q06831 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms