Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hspg2Q05793 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hspg2Q05793 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Hspg2Q05793 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hspg2Q05793 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.45□□□□□ -0.1
Hspg2Q05793 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hspg2Q05793 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hspg2Q05793 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hspg2Q05793 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hspg2Q05793 Mir6236-201ENSMUST00000184437 123 ntBASIC14.45□□□□□ -0.1
Hspg2Q05793 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.45□□□□□ -0.1
Hspg2Q05793 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hspg2Q05793 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hspg2Q05793 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hspg2Q05793 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.45□□□□□ -0.1
Hspg2Q05793 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hspg2Q05793 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hspg2Q05793 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hspg2Q05793 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hspg2Q05793 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hspg2Q05793 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hspg2Q05793 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hspg2Q05793 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hspg2Q05793 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hspg2Q05793 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hspg2Q05793 Gm5643-201ENSMUST00000117081 966 ntBASIC14.44□□□□□ -0.1
Hspg2Q05793 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hspg2Q05793 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hspg2Q05793 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hspg2Q05793 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.44□□□□□ -0.1
Hspg2Q05793 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.44□□□□□ -0.1
Hspg2Q05793 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.44□□□□□ -0.1
Hspg2Q05793 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Hspg2Q05793 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hspg2Q05793 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hspg2Q05793 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hspg2Q05793 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hspg2Q05793 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hspg2Q05793 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hspg2Q05793 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hspg2Q05793 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hspg2Q05793 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hspg2Q05793 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hspg2Q05793 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hspg2Q05793 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hspg2Q05793 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.42□□□□□ -0.1
Hspg2Q05793 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hspg2Q05793 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hspg2Q05793 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hspg2Q05793 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hspg2Q05793 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hspg2Q05793 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hspg2Q05793 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hspg2Q05793 Gm6211-202ENSMUST00000167849 925 ntBASIC14.42□□□□□ -0.1
Hspg2Q05793 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hspg2Q05793 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hspg2Q05793 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hspg2Q05793 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hspg2Q05793 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hspg2Q05793 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hspg2Q05793 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hspg2Q05793 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.42□□□□□ -0.1
Hspg2Q05793 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hspg2Q05793 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hspg2Q05793 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hspg2Q05793 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hspg2Q05793 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hspg2Q05793 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hspg2Q05793 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hspg2Q05793 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hspg2Q05793 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Hspg2Q05793 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.41□□□□□ -0.1
Hspg2Q05793 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hspg2Q05793 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Hspg2Q05793 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hspg2Q05793 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
Hspg2Q05793 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hspg2Q05793 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hspg2Q05793 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hspg2Q05793 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hspg2Q05793 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.41□□□□□ -0.1
Hspg2Q05793 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hspg2Q05793 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hspg2Q05793 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.41□□□□□ -0.1
Hspg2Q05793 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hspg2Q05793 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.4□□□□□ -0.1
Hspg2Q05793 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hspg2Q05793 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hspg2Q05793 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hspg2Q05793 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hspg2Q05793 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hspg2Q05793 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hspg2Q05793 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.4□□□□□ -0.1
Hspg2Q05793 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hspg2Q05793 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hspg2Q05793 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hspg2Q05793 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.4□□□□□ -0.1
Hspg2Q05793 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.4□□□□□ -0.1
Hspg2Q05793 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.4□□□□□ -0.1
Hspg2Q05793 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms