Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smn1P97801 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.5■□□□□ 0.23
Smn1P97801 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Smn1P97801 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.5■□□□□ 0.23
Smn1P97801 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smn1P97801 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.5■□□□□ 0.23
Smn1P97801 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smn1P97801 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.5■□□□□ 0.23
Smn1P97801 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smn1P97801 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smn1P97801 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smn1P97801 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smn1P97801 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smn1P97801 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
Smn1P97801 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smn1P97801 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smn1P97801 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smn1P97801 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smn1P97801 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smn1P97801 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smn1P97801 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smn1P97801 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smn1P97801 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Smn1P97801 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smn1P97801 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smn1P97801 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.49■□□□□ 0.23
Smn1P97801 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smn1P97801 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smn1P97801 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smn1P97801 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smn1P97801 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smn1P97801 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smn1P97801 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smn1P97801 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smn1P97801 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smn1P97801 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.48■□□□□ 0.23
Smn1P97801 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smn1P97801 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smn1P97801 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Smn1P97801 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.48■□□□□ 0.23
Smn1P97801 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smn1P97801 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smn1P97801 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smn1P97801 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smn1P97801 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smn1P97801 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Smn1P97801 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.47■□□□□ 0.23
Smn1P97801 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smn1P97801 AA386476-201ENSMUST00000098781 1665 ntBASIC16.47■□□□□ 0.23
Smn1P97801 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smn1P97801 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Smn1P97801 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smn1P97801 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smn1P97801 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Smn1P97801 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.47■□□□□ 0.23
Smn1P97801 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smn1P97801 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Smn1P97801 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smn1P97801 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Smn1P97801 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smn1P97801 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smn1P97801 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smn1P97801 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smn1P97801 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.46■□□□□ 0.23
Smn1P97801 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smn1P97801 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smn1P97801 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smn1P97801 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smn1P97801 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smn1P97801 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smn1P97801 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.46■□□□□ 0.23
Smn1P97801 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.46■□□□□ 0.23
Smn1P97801 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smn1P97801 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smn1P97801 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smn1P97801 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Smn1P97801 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.46■□□□□ 0.22
Smn1P97801 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.46■□□□□ 0.22
Smn1P97801 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smn1P97801 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smn1P97801 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Smn1P97801 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smn1P97801 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smn1P97801 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smn1P97801 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smn1P97801 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Smn1P97801 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Smn1P97801 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Smn1P97801 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smn1P97801 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.45■□□□□ 0.22
Smn1P97801 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.45■□□□□ 0.22
Smn1P97801 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smn1P97801 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Smn1P97801 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smn1P97801 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Smn1P97801 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smn1P97801 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smn1P97801 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smn1P97801 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smn1P97801 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms