Protein–RNA interactions for Protein: P97368

Meis3, Homeobox protein Meis3, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Meis3P97368 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Meis3P97368 BC021767-201ENSMUST00000126387 1716 ntBASIC20.64■□□□□ 0.89
Meis3P97368 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Meis3P97368 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Meis3P97368 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Meis3P97368 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Meis3P97368 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Meis3P97368 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Meis3P97368 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.63■□□□□ 0.89
Meis3P97368 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Meis3P97368 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Meis3P97368 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Meis3P97368 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Meis3P97368 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Meis3P97368 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.63■□□□□ 0.89
Meis3P97368 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Meis3P97368 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Meis3P97368 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Meis3P97368 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Meis3P97368 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Meis3P97368 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Meis3P97368 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.62■□□□□ 0.89
Meis3P97368 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Meis3P97368 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.62■□□□□ 0.89
Meis3P97368 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Meis3P97368 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
Meis3P97368 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Meis3P97368 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Meis3P97368 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Meis3P97368 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Meis3P97368 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Meis3P97368 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Meis3P97368 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Meis3P97368 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Meis3P97368 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Meis3P97368 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.61■□□□□ 0.89
Meis3P97368 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.61■□□□□ 0.89
Meis3P97368 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Meis3P97368 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Meis3P97368 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Meis3P97368 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Meis3P97368 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Meis3P97368 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Meis3P97368 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Meis3P97368 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Meis3P97368 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Meis3P97368 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Meis3P97368 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.6■□□□□ 0.89
Meis3P97368 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Meis3P97368 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Meis3P97368 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Meis3P97368 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Meis3P97368 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Meis3P97368 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Meis3P97368 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Meis3P97368 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Meis3P97368 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Meis3P97368 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Meis3P97368 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.59■□□□□ 0.89
Meis3P97368 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Meis3P97368 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Meis3P97368 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Meis3P97368 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Meis3P97368 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Meis3P97368 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Meis3P97368 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Meis3P97368 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Meis3P97368 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Meis3P97368 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Meis3P97368 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Meis3P97368 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
Meis3P97368 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Meis3P97368 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Meis3P97368 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.57■□□□□ 0.88
Meis3P97368 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
Meis3P97368 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.57■□□□□ 0.88
Meis3P97368 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Meis3P97368 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Meis3P97368 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Meis3P97368 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Meis3P97368 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Meis3P97368 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Meis3P97368 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Meis3P97368 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Meis3P97368 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.56■□□□□ 0.88
Meis3P97368 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.56■□□□□ 0.88
Meis3P97368 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.56■□□□□ 0.88
Meis3P97368 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Meis3P97368 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Meis3P97368 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Meis3P97368 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Meis3P97368 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Meis3P97368 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Meis3P97368 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Meis3P97368 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Meis3P97368 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.55■□□□□ 0.88
Meis3P97368 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.55■□□□□ 0.88
Meis3P97368 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.55■□□□□ 0.88
Meis3P97368 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Meis3P97368 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms