Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CiitaP79621 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21■□□□□ 0.95
CiitaP79621 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CiitaP79621 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21■□□□□ 0.95
CiitaP79621 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CiitaP79621 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CiitaP79621 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CiitaP79621 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CiitaP79621 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CiitaP79621 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CiitaP79621 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CiitaP79621 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CiitaP79621 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CiitaP79621 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CiitaP79621 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CiitaP79621 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CiitaP79621 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
CiitaP79621 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CiitaP79621 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CiitaP79621 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CiitaP79621 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CiitaP79621 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CiitaP79621 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CiitaP79621 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.98■□□□□ 0.95
CiitaP79621 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CiitaP79621 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CiitaP79621 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CiitaP79621 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CiitaP79621 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CiitaP79621 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.97■□□□□ 0.95
CiitaP79621 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CiitaP79621 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CiitaP79621 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
CiitaP79621 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CiitaP79621 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
CiitaP79621 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CiitaP79621 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CiitaP79621 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
CiitaP79621 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.96■□□□□ 0.95
CiitaP79621 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CiitaP79621 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CiitaP79621 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CiitaP79621 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CiitaP79621 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.96■□□□□ 0.95
CiitaP79621 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CiitaP79621 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CiitaP79621 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CiitaP79621 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CiitaP79621 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CiitaP79621 Gm7860-201ENSMUST00000121190 879 ntBASIC20.95■□□□□ 0.94
CiitaP79621 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CiitaP79621 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.95■□□□□ 0.94
CiitaP79621 Gm7514-201ENSMUST00000209475 934 ntBASIC20.95■□□□□ 0.94
CiitaP79621 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CiitaP79621 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CiitaP79621 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CiitaP79621 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CiitaP79621 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CiitaP79621 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.94■□□□□ 0.94
CiitaP79621 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CiitaP79621 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CiitaP79621 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CiitaP79621 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CiitaP79621 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CiitaP79621 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CiitaP79621 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CiitaP79621 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CiitaP79621 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CiitaP79621 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.93■□□□□ 0.94
CiitaP79621 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CiitaP79621 Gm13534-201ENSMUST00000121169 513 ntBASIC20.93■□□□□ 0.94
CiitaP79621 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.93■□□□□ 0.94
CiitaP79621 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CiitaP79621 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CiitaP79621 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CiitaP79621 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CiitaP79621 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CiitaP79621 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CiitaP79621 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CiitaP79621 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CiitaP79621 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CiitaP79621 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CiitaP79621 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CiitaP79621 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CiitaP79621 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CiitaP79621 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.92■□□□□ 0.94
CiitaP79621 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CiitaP79621 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CiitaP79621 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CiitaP79621 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CiitaP79621 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.91■□□□□ 0.94
CiitaP79621 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.91■□□□□ 0.94
CiitaP79621 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CiitaP79621 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CiitaP79621 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CiitaP79621 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CiitaP79621 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CiitaP79621 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CiitaP79621 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CiitaP79621 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms