Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcr4P70658 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcr4P70658 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcr4P70658 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcr4P70658 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cxcr4P70658 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcr4P70658 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cxcr4P70658 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcr4P70658 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Cxcr4P70658 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.04■□□□□ 0.48
Cxcr4P70658 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcr4P70658 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcr4P70658 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cxcr4P70658 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcr4P70658 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.03■□□□□ 0.48
Cxcr4P70658 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.03■□□□□ 0.48
Cxcr4P70658 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcr4P70658 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcr4P70658 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcr4P70658 Mir7075-201ENSMUST00000184187 82 ntBASIC18.03■□□□□ 0.48
Cxcr4P70658 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcr4P70658 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcr4P70658 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Cxcr4P70658 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.03■□□□□ 0.48
Cxcr4P70658 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcr4P70658 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcr4P70658 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcr4P70658 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcr4P70658 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcr4P70658 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcr4P70658 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcr4P70658 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcr4P70658 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcr4P70658 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Cxcr4P70658 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcr4P70658 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcr4P70658 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cxcr4P70658 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cxcr4P70658 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cxcr4P70658 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcr4P70658 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcr4P70658 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcr4P70658 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcr4P70658 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcr4P70658 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcr4P70658 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcr4P70658 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcr4P70658 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcr4P70658 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cxcr4P70658 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Cxcr4P70658 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Cxcr4P70658 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
Cxcr4P70658 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcr4P70658 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcr4P70658 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcr4P70658 Gm5784-201ENSMUST00000179344 2478 ntBASIC18■□□□□ 0.47
Cxcr4P70658 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcr4P70658 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcr4P70658 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cxcr4P70658 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18■□□□□ 0.47
Cxcr4P70658 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
Cxcr4P70658 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18■□□□□ 0.47
Cxcr4P70658 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcr4P70658 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
Cxcr4P70658 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18■□□□□ 0.47
Cxcr4P70658 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18■□□□□ 0.47
Cxcr4P70658 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcr4P70658 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcr4P70658 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cxcr4P70658 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cxcr4P70658 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcr4P70658 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcr4P70658 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcr4P70658 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcr4P70658 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Cxcr4P70658 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cxcr4P70658 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcr4P70658 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cxcr4P70658 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.99■□□□□ 0.47
Cxcr4P70658 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcr4P70658 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcr4P70658 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cxcr4P70658 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
Cxcr4P70658 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cxcr4P70658 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcr4P70658 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcr4P70658 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcr4P70658 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Cxcr4P70658 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.98■□□□□ 0.47
Cxcr4P70658 Serp2-204ENSMUST00000228055 705 ntBASIC17.98■□□□□ 0.47
Cxcr4P70658 Gm6139-201ENSMUST00000079261 882 ntBASIC17.98■□□□□ 0.47
Cxcr4P70658 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.98■□□□□ 0.47
Cxcr4P70658 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcr4P70658 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcr4P70658 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cxcr4P70658 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Cxcr4P70658 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcr4P70658 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcr4P70658 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcr4P70658 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms