Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gcm1P70348 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gcm1P70348 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gcm1P70348 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Gcm1P70348 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gcm1P70348 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gcm1P70348 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.14■□□□□ 0.17
Gcm1P70348 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Gcm1P70348 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Gcm1P70348 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gcm1P70348 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Gcm1P70348 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.13■□□□□ 0.17
Gcm1P70348 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
Gcm1P70348 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gcm1P70348 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gcm1P70348 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gcm1P70348 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gcm1P70348 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gcm1P70348 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gcm1P70348 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gcm1P70348 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gcm1P70348 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gcm1P70348 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gcm1P70348 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gcm1P70348 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gcm1P70348 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gcm1P70348 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gcm1P70348 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gcm1P70348 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gcm1P70348 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gcm1P70348 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gcm1P70348 Gm27801-201ENSMUST00000184174 223 ntBASIC16.12■□□□□ 0.17
Gcm1P70348 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gcm1P70348 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gcm1P70348 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gcm1P70348 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gcm1P70348 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
Gcm1P70348 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gcm1P70348 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.12■□□□□ 0.17
Gcm1P70348 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gcm1P70348 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
Gcm1P70348 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gcm1P70348 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gcm1P70348 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gcm1P70348 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.11■□□□□ 0.17
Gcm1P70348 Gm42778-201ENSMUST00000199644 553 ntBASIC16.11■□□□□ 0.17
Gcm1P70348 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gcm1P70348 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.11■□□□□ 0.17
Gcm1P70348 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Gcm1P70348 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Gcm1P70348 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gcm1P70348 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gcm1P70348 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.11■□□□□ 0.17
Gcm1P70348 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Gcm1P70348 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Gcm1P70348 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.1■□□□□ 0.17
Gcm1P70348 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gcm1P70348 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.09■□□□□ 0.17
Gcm1P70348 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.09■□□□□ 0.17
Gcm1P70348 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gcm1P70348 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gcm1P70348 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.09■□□□□ 0.17
Gcm1P70348 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.09■□□□□ 0.17
Gcm1P70348 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Gcm1P70348 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.09■□□□□ 0.17
Gcm1P70348 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gcm1P70348 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.09■□□□□ 0.17
Gcm1P70348 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gcm1P70348 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gcm1P70348 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gcm1P70348 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gcm1P70348 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gcm1P70348 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gcm1P70348 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gcm1P70348 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Gcm1P70348 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Gcm1P70348 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gcm1P70348 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gcm1P70348 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gcm1P70348 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gcm1P70348 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gcm1P70348 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gcm1P70348 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.08■□□□□ 0.16
Gcm1P70348 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms