Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx1P63006 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx1P63006 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx1P63006 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx1P63006 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx1P63006 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx1P63006 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx1P63006 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx1P63006 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.97■□□□□ 0.63
Lhx1P63006 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx1P63006 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx1P63006 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx1P63006 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx1P63006 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.97■□□□□ 0.63
Lhx1P63006 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx1P63006 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx1P63006 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx1P63006 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx1P63006 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx1P63006 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx1P63006 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx1P63006 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx1P63006 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx1P63006 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx1P63006 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Lhx1P63006 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx1P63006 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx1P63006 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Lhx1P63006 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.96■□□□□ 0.63
Lhx1P63006 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx1P63006 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx1P63006 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx1P63006 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx1P63006 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Lhx1P63006 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx1P63006 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx1P63006 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx1P63006 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx1P63006 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.95■□□□□ 0.62
Lhx1P63006 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.95■□□□□ 0.62
Lhx1P63006 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx1P63006 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.95■□□□□ 0.62
Lhx1P63006 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx1P63006 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx1P63006 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx1P63006 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx1P63006 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx1P63006 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx1P63006 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx1P63006 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Lhx1P63006 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Lhx1P63006 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx1P63006 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx1P63006 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx1P63006 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Lhx1P63006 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx1P63006 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx1P63006 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx1P63006 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.93■□□□□ 0.62
Lhx1P63006 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx1P63006 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx1P63006 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx1P63006 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Lhx1P63006 Gm38205-201ENSMUST00000192243 258 ntBASIC18.93■□□□□ 0.62
Lhx1P63006 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Lhx1P63006 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Lhx1P63006 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
Lhx1P63006 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx1P63006 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.93■□□□□ 0.62
Lhx1P63006 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx1P63006 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx1P63006 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.92■□□□□ 0.62
Lhx1P63006 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx1P63006 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx1P63006 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx1P63006 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.92■□□□□ 0.62
Lhx1P63006 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx1P63006 Gm13146-201ENSMUST00000118508 780 ntBASIC18.92■□□□□ 0.62
Lhx1P63006 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.92■□□□□ 0.62
Lhx1P63006 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.92■□□□□ 0.62
Lhx1P63006 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx1P63006 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.92■□□□□ 0.62
Lhx1P63006 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.92■□□□□ 0.62
Lhx1P63006 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx1P63006 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx1P63006 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.92■□□□□ 0.62
Lhx1P63006 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx1P63006 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx1P63006 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx1P63006 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx1P63006 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx1P63006 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.91■□□□□ 0.62
Lhx1P63006 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Lhx1P63006 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Lhx1P63006 Gm7860-201ENSMUST00000121190 879 ntBASIC18.91■□□□□ 0.62
Lhx1P63006 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx1P63006 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx1P63006 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx1P63006 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Lhx1P63006 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms