Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.89■□□□□ 0.29
Lsm6P62313 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm6P62313 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm6P62313 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm6P62313 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm6P62313 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm6P62313 Gm43173-201ENSMUST00000202246 593 ntBASIC16.88■□□□□ 0.29
Lsm6P62313 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.88■□□□□ 0.29
Lsm6P62313 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm6P62313 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.88■□□□□ 0.29
Lsm6P62313 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Lsm6P62313 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm6P62313 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.87■□□□□ 0.29
Lsm6P62313 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm6P62313 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Lsm6P62313 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm6P62313 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Lsm6P62313 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm6P62313 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm6P62313 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm6P62313 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm6P62313 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Lsm6P62313 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Lsm6P62313 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm6P62313 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm6P62313 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm6P62313 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm6P62313 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm6P62313 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.86■□□□□ 0.29
Lsm6P62313 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm6P62313 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm6P62313 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm6P62313 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Lsm6P62313 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm6P62313 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Lsm6P62313 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm6P62313 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm6P62313 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.85■□□□□ 0.29
Lsm6P62313 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm6P62313 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm6P62313 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lsm6P62313 Gm11421-201ENSMUST00000122124 294 ntBASIC16.85■□□□□ 0.29
Lsm6P62313 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.85■□□□□ 0.29
Lsm6P62313 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.85■□□□□ 0.29
Lsm6P62313 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm6P62313 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm6P62313 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm6P62313 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.84■□□□□ 0.29
Lsm6P62313 Gm6139-201ENSMUST00000079261 882 ntBASIC16.84■□□□□ 0.29
Lsm6P62313 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Lsm6P62313 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm6P62313 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lsm6P62313 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm6P62313 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm6P62313 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Lsm6P62313 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm6P62313 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm6P62313 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.83■□□□□ 0.28
Lsm6P62313 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.83■□□□□ 0.28
Lsm6P62313 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm6P62313 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm6P62313 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm6P62313 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
Lsm6P62313 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm6P62313 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm6P62313 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm6P62313 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm6P62313 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm6P62313 Gm45417-201ENSMUST00000209533 758 ntBASIC16.82■□□□□ 0.28
Lsm6P62313 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm6P62313 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm6P62313 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm6P62313 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm6P62313 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.81■□□□□ 0.28
Lsm6P62313 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Lsm6P62313 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm6P62313 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm6P62313 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm6P62313 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm6P62313 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
Lsm6P62313 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm6P62313 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm6P62313 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms