Protein–RNA interactions for Protein: P58321

Uchl4, Ubiquitin carboxyl-terminal hydrolase isozyme L4, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl4P58321 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.53■□□□□ 0.88
Uchl4P58321 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.53■□□□□ 0.88
Uchl4P58321 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uchl4P58321 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uchl4P58321 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uchl4P58321 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uchl4P58321 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uchl4P58321 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Uchl4P58321 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Uchl4P58321 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Uchl4P58321 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Uchl4P58321 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Uchl4P58321 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Uchl4P58321 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Uchl4P58321 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Uchl4P58321 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Uchl4P58321 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Uchl4P58321 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Uchl4P58321 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Uchl4P58321 Gm27801-201ENSMUST00000184174 223 ntBASIC20.51■□□□□ 0.87
Uchl4P58321 Gm9988-201ENSMUST00000069786 435 ntBASIC20.51■□□□□ 0.87
Uchl4P58321 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Uchl4P58321 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Uchl4P58321 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Uchl4P58321 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Uchl4P58321 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Uchl4P58321 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uchl4P58321 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.5■□□□□ 0.87
Uchl4P58321 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Uchl4P58321 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uchl4P58321 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uchl4P58321 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uchl4P58321 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uchl4P58321 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uchl4P58321 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uchl4P58321 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uchl4P58321 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Uchl4P58321 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.49■□□□□ 0.87
Uchl4P58321 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
Uchl4P58321 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uchl4P58321 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Uchl4P58321 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uchl4P58321 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Uchl4P58321 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Uchl4P58321 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uchl4P58321 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Uchl4P58321 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uchl4P58321 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Uchl4P58321 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.48■□□□□ 0.87
Uchl4P58321 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Uchl4P58321 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.48■□□□□ 0.87
Uchl4P58321 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Uchl4P58321 Gm26571-201ENSMUST00000181399 666 ntBASIC20.48■□□□□ 0.87
Uchl4P58321 Gm42642-201ENSMUST00000200683 355 ntBASIC20.48■□□□□ 0.87
Uchl4P58321 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.48■□□□□ 0.87
Uchl4P58321 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Uchl4P58321 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Uchl4P58321 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uchl4P58321 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Uchl4P58321 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
Uchl4P58321 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uchl4P58321 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.47■□□□□ 0.87
Uchl4P58321 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uchl4P58321 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Uchl4P58321 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.47■□□□□ 0.87
Uchl4P58321 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Uchl4P58321 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.46■□□□□ 0.87
Uchl4P58321 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uchl4P58321 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Uchl4P58321 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uchl4P58321 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Uchl4P58321 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.46■□□□□ 0.87
Uchl4P58321 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.46■□□□□ 0.87
Uchl4P58321 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.46■□□□□ 0.87
Uchl4P58321 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.46■□□□□ 0.87
Uchl4P58321 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uchl4P58321 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uchl4P58321 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.46■□□□□ 0.87
Uchl4P58321 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Uchl4P58321 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Uchl4P58321 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Uchl4P58321 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
Uchl4P58321 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uchl4P58321 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uchl4P58321 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uchl4P58321 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Uchl4P58321 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Uchl4P58321 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Uchl4P58321 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uchl4P58321 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Uchl4P58321 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uchl4P58321 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.44■□□□□ 0.86
Uchl4P58321 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.44■□□□□ 0.86
Uchl4P58321 Gm42778-201ENSMUST00000199644 553 ntBASIC20.44■□□□□ 0.86
Uchl4P58321 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.44■□□□□ 0.86
Uchl4P58321 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uchl4P58321 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uchl4P58321 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Uchl4P58321 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Uchl4P58321 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms