Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CtskP55097 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CtskP55097 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CtskP55097 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CtskP55097 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CtskP55097 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CtskP55097 Reep4-203ENSMUST00000226563 1444 ntBASIC18.86■□□□□ 0.61
CtskP55097 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CtskP55097 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.86■□□□□ 0.61
CtskP55097 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.86■□□□□ 0.61
CtskP55097 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CtskP55097 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CtskP55097 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.86■□□□□ 0.61
CtskP55097 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CtskP55097 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CtskP55097 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CtskP55097 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.86■□□□□ 0.61
CtskP55097 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CtskP55097 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
CtskP55097 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CtskP55097 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.85■□□□□ 0.61
CtskP55097 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CtskP55097 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CtskP55097 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CtskP55097 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CtskP55097 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CtskP55097 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.85■□□□□ 0.61
CtskP55097 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.85■□□□□ 0.61
CtskP55097 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CtskP55097 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CtskP55097 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CtskP55097 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CtskP55097 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.85■□□□□ 0.61
CtskP55097 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CtskP55097 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CtskP55097 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CtskP55097 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CtskP55097 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CtskP55097 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.84■□□□□ 0.61
CtskP55097 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CtskP55097 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.84■□□□□ 0.61
CtskP55097 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.84■□□□□ 0.61
CtskP55097 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CtskP55097 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CtskP55097 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CtskP55097 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CtskP55097 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CtskP55097 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CtskP55097 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CtskP55097 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CtskP55097 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CtskP55097 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CtskP55097 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CtskP55097 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CtskP55097 Gm12933-201ENSMUST00000120203 872 ntBASIC18.83■□□□□ 0.6
CtskP55097 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CtskP55097 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CtskP55097 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CtskP55097 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CtskP55097 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CtskP55097 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CtskP55097 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CtskP55097 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtskP55097 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtskP55097 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CtskP55097 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CtskP55097 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtskP55097 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtskP55097 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CtskP55097 Gm27011-201ENSMUST00000182352 972 ntBASIC18.82■□□□□ 0.6
CtskP55097 Gm10602-201ENSMUST00000098239 609 ntBASIC18.82■□□□□ 0.6
CtskP55097 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtskP55097 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CtskP55097 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CtskP55097 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtskP55097 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtskP55097 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtskP55097 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtskP55097 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CtskP55097 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CtskP55097 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtskP55097 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtskP55097 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CtskP55097 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CtskP55097 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtskP55097 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtskP55097 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtskP55097 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CtskP55097 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CtskP55097 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CtskP55097 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CtskP55097 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CtskP55097 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CtskP55097 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CtskP55097 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CtskP55097 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CtskP55097 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CtskP55097 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CtskP55097 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CtskP55097 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms