Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NcanP55066 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NcanP55066 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NcanP55066 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.64■□□□□ 0.89
NcanP55066 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.64■□□□□ 0.89
NcanP55066 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
NcanP55066 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.64■□□□□ 0.89
NcanP55066 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.64■□□□□ 0.89
NcanP55066 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NcanP55066 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NcanP55066 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.63■□□□□ 0.89
NcanP55066 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NcanP55066 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NcanP55066 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.63■□□□□ 0.89
NcanP55066 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NcanP55066 Gm11249-201ENSMUST00000117071 859 ntBASIC20.63■□□□□ 0.89
NcanP55066 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.63■□□□□ 0.89
NcanP55066 Gm10517-202ENSMUST00000192970 758 ntBASIC20.63■□□□□ 0.89
NcanP55066 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NcanP55066 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NcanP55066 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NcanP55066 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NcanP55066 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
NcanP55066 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NcanP55066 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.62■□□□□ 0.89
NcanP55066 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NcanP55066 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NcanP55066 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NcanP55066 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NcanP55066 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NcanP55066 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NcanP55066 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NcanP55066 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NcanP55066 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NcanP55066 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NcanP55066 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NcanP55066 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NcanP55066 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NcanP55066 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NcanP55066 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NcanP55066 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NcanP55066 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NcanP55066 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.6■□□□□ 0.89
NcanP55066 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.6■□□□□ 0.89
NcanP55066 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NcanP55066 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NcanP55066 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NcanP55066 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
NcanP55066 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NcanP55066 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NcanP55066 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NcanP55066 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NcanP55066 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NcanP55066 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
NcanP55066 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.58■□□□□ 0.89
NcanP55066 Gm10231-201ENSMUST00000181584 441 ntBASIC20.58■□□□□ 0.89
NcanP55066 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NcanP55066 Gm10175-202ENSMUST00000208752 441 ntBASIC20.58■□□□□ 0.89
NcanP55066 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.58■□□□□ 0.89
NcanP55066 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.58■□□□□ 0.89
NcanP55066 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NcanP55066 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NcanP55066 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NcanP55066 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NcanP55066 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
NcanP55066 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NcanP55066 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NcanP55066 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
NcanP55066 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NcanP55066 Gm7860-201ENSMUST00000121190 879 ntBASIC20.57■□□□□ 0.88
NcanP55066 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NcanP55066 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.57■□□□□ 0.88
NcanP55066 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NcanP55066 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
NcanP55066 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NcanP55066 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.56■□□□□ 0.88
NcanP55066 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.56■□□□□ 0.88
NcanP55066 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.56■□□□□ 0.88
NcanP55066 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NcanP55066 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NcanP55066 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NcanP55066 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NcanP55066 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
NcanP55066 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NcanP55066 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NcanP55066 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NcanP55066 Mir1199-201ENSMUST00000117015 119 ntBASIC20.55■□□□□ 0.88
NcanP55066 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NcanP55066 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NcanP55066 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NcanP55066 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NcanP55066 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
NcanP55066 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NcanP55066 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NcanP55066 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NcanP55066 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NcanP55066 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.54■□□□□ 0.88
NcanP55066 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NcanP55066 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NcanP55066 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms