Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Limk1P53668 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Limk1P53668 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Limk1P53668 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Limk1P53668 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk1P53668 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Limk1P53668 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.88■□□□□ 0.61
Limk1P53668 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Limk1P53668 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.88■□□□□ 0.61
Limk1P53668 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.88■□□□□ 0.61
Limk1P53668 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk1P53668 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk1P53668 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk1P53668 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk1P53668 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk1P53668 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk1P53668 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk1P53668 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk1P53668 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.88■□□□□ 0.61
Limk1P53668 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk1P53668 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Limk1P53668 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Limk1P53668 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Limk1P53668 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk1P53668 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Limk1P53668 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Limk1P53668 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Limk1P53668 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk1P53668 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk1P53668 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Limk1P53668 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.87■□□□□ 0.61
Limk1P53668 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk1P53668 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Limk1P53668 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk1P53668 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Limk1P53668 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk1P53668 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk1P53668 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Limk1P53668 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Limk1P53668 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk1P53668 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk1P53668 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Limk1P53668 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk1P53668 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Limk1P53668 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Limk1P53668 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Limk1P53668 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk1P53668 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk1P53668 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Limk1P53668 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk1P53668 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk1P53668 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Limk1P53668 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Limk1P53668 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Limk1P53668 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Limk1P53668 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Limk1P53668 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Limk1P53668 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.85■□□□□ 0.61
Limk1P53668 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Limk1P53668 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Limk1P53668 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Limk1P53668 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Limk1P53668 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Limk1P53668 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Limk1P53668 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Limk1P53668 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Limk1P53668 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
Limk1P53668 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Limk1P53668 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.84■□□□□ 0.61
Limk1P53668 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.84■□□□□ 0.61
Limk1P53668 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Limk1P53668 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Limk1P53668 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Limk1P53668 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Limk1P53668 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.84■□□□□ 0.61
Limk1P53668 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Limk1P53668 Iqck-206ENSMUST00000208658 2891 ntBASIC18.83■□□□□ 0.61
Limk1P53668 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.83■□□□□ 0.61
Limk1P53668 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Limk1P53668 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Limk1P53668 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Limk1P53668 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Limk1P53668 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Limk1P53668 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Limk1P53668 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Limk1P53668 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Limk1P53668 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Limk1P53668 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Limk1P53668 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Limk1P53668 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.82■□□□□ 0.6
Limk1P53668 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.82■□□□□ 0.6
Limk1P53668 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Limk1P53668 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.82■□□□□ 0.6
Limk1P53668 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Limk1P53668 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Limk1P53668 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Limk1P53668 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
Limk1P53668 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Limk1P53668 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Limk1P53668 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms