Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdx1P52946 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Pdx1P52946 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.1■□□□□ 0.65
Pdx1P52946 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Pdx1P52946 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdx1P52946 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pdx1P52946 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdx1P52946 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdx1P52946 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdx1P52946 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdx1P52946 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdx1P52946 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.09■□□□□ 0.65
Pdx1P52946 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Pdx1P52946 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdx1P52946 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdx1P52946 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdx1P52946 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdx1P52946 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Pdx1P52946 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdx1P52946 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.09■□□□□ 0.65
Pdx1P52946 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pdx1P52946 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pdx1P52946 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pdx1P52946 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Pdx1P52946 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pdx1P52946 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pdx1P52946 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Pdx1P52946 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.08■□□□□ 0.64
Pdx1P52946 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pdx1P52946 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.08■□□□□ 0.64
Pdx1P52946 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.08■□□□□ 0.64
Pdx1P52946 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdx1P52946 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.08■□□□□ 0.64
Pdx1P52946 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Pdx1P52946 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdx1P52946 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdx1P52946 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdx1P52946 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdx1P52946 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdx1P52946 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pdx1P52946 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdx1P52946 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdx1P52946 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdx1P52946 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdx1P52946 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdx1P52946 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdx1P52946 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdx1P52946 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pdx1P52946 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdx1P52946 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pdx1P52946 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdx1P52946 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdx1P52946 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.06■□□□□ 0.64
Pdx1P52946 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.06■□□□□ 0.64
Pdx1P52946 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pdx1P52946 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdx1P52946 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.06■□□□□ 0.64
Pdx1P52946 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdx1P52946 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pdx1P52946 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pdx1P52946 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdx1P52946 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Pdx1P52946 Gm27801-201ENSMUST00000184174 223 ntBASIC19.05■□□□□ 0.64
Pdx1P52946 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
Pdx1P52946 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdx1P52946 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.05■□□□□ 0.64
Pdx1P52946 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdx1P52946 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Pdx1P52946 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdx1P52946 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pdx1P52946 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdx1P52946 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pdx1P52946 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdx1P52946 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pdx1P52946 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pdx1P52946 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pdx1P52946 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.04■□□□□ 0.64
Pdx1P52946 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Pdx1P52946 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdx1P52946 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdx1P52946 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pdx1P52946 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pdx1P52946 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.03■□□□□ 0.64
Pdx1P52946 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.03■□□□□ 0.64
Pdx1P52946 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdx1P52946 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdx1P52946 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pdx1P52946 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdx1P52946 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdx1P52946 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Pdx1P52946 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdx1P52946 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdx1P52946 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pdx1P52946 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pdx1P52946 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdx1P52946 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdx1P52946 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Pdx1P52946 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdx1P52946 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdx1P52946 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms