Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Lhx3P50481 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.65■□□□□ 0.74
Lhx3P50481 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Lhx3P50481 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx3P50481 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Lhx3P50481 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Lhx3P50481 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Lhx3P50481 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Lhx3P50481 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Lhx3P50481 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Lhx3P50481 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Lhx3P50481 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx3P50481 Gm13234-201ENSMUST00000120010 747 ntBASIC19.64■□□□□ 0.73
Lhx3P50481 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx3P50481 Gm42778-201ENSMUST00000199644 553 ntBASIC19.64■□□□□ 0.73
Lhx3P50481 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
Lhx3P50481 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx3P50481 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Lhx3P50481 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx3P50481 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx3P50481 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx3P50481 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx3P50481 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx3P50481 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.63■□□□□ 0.73
Lhx3P50481 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx3P50481 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx3P50481 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx3P50481 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.63■□□□□ 0.73
Lhx3P50481 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx3P50481 Gm7860-201ENSMUST00000121190 879 ntBASIC19.63■□□□□ 0.73
Lhx3P50481 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.63■□□□□ 0.73
Lhx3P50481 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Lhx3P50481 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx3P50481 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Lhx3P50481 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx3P50481 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.62■□□□□ 0.73
Lhx3P50481 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Lhx3P50481 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Lhx3P50481 Gm10849-201ENSMUST00000100397 618 ntBASIC19.62■□□□□ 0.73
Lhx3P50481 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx3P50481 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.62■□□□□ 0.73
Lhx3P50481 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx3P50481 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.62■□□□□ 0.73
Lhx3P50481 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx3P50481 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Lhx3P50481 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx3P50481 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx3P50481 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx3P50481 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx3P50481 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx3P50481 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx3P50481 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx3P50481 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.61■□□□□ 0.73
Lhx3P50481 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx3P50481 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx3P50481 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Lhx3P50481 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx3P50481 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx3P50481 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx3P50481 Gm18671-201ENSMUST00000214826 683 ntBASIC19.61■□□□□ 0.73
Lhx3P50481 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx3P50481 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx3P50481 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx3P50481 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Lhx3P50481 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.6■□□□□ 0.73
Lhx3P50481 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx3P50481 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx3P50481 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Lhx3P50481 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx3P50481 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.6■□□□□ 0.73
Lhx3P50481 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.6■□□□□ 0.73
Lhx3P50481 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx3P50481 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Lhx3P50481 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Lhx3P50481 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx3P50481 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx3P50481 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx3P50481 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx3P50481 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Lhx3P50481 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx3P50481 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx3P50481 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Lhx3P50481 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx3P50481 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lhx3P50481 Gm13146-201ENSMUST00000118508 780 ntBASIC19.58■□□□□ 0.72
Lhx3P50481 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lhx3P50481 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lhx3P50481 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.58■□□□□ 0.72
Lhx3P50481 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lhx3P50481 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lhx3P50481 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lhx3P50481 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.57■□□□□ 0.72
Lhx3P50481 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.57■□□□□ 0.72
Lhx3P50481 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.57■□□□□ 0.72
Lhx3P50481 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.57■□□□□ 0.72
Lhx3P50481 AV356131-201ENSMUST00000206201 750 ntBASIC19.57■□□□□ 0.72
Lhx3P50481 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lhx3P50481 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lhx3P50481 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.57■□□□□ 0.72
Lhx3P50481 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms